Vibrio nigripulchritudo: VIBNI_B1702
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Entry
VIBNI_B1702 CDS
T02871
Symbol
kdgR
Name
(GenBank) Pectin degradation repressor protein kdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_B1702 (kdgR)
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VIBNI_B1702 (kdgR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_11
MarR_2
HTH_5
MarR
HTH_24
HTH_6
Fe_dep_repress
Mga
HTH_22
TrmB
FUR
Rrf2
HTH_DeoR
HTH_29
HTH_Crp_2
HTH_7
FeoC
DUF3791
HTH_23
HTH_AsnC-type
PadR
Dimerisation2-like_dom
HTH_28
HTH_34
HTH_36
HTH_38
HTH_26
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CCO61434
UniProt:
U4KHP4
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All DBs
Position
2:complement(1735383..1736171)
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AA seq
262 aa
AA seq
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MTTTKQPESVSSVLKTFGILQALSTQKDIGISELAQRLMMSKSTVYRFLQTMKTLGYVSQ
EGESENYSLTLKLFELGASALEYVDLVDLADIEMRRISDLTNEALHLGALDGDGIIYIHK
IDSKYNLRMQSRIGRRNPLHTTAIGKVLLAERDEEETRNILSFVEFTKSTENTHEDVESL
LAELPQVKEQGFGEDNEEQEVGLRCLAVPVYDRFNQVIAGMSVSLPTIRFTEEKKVEYIA
ELHAAAARISLKLGCKAYPHGK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaaaacaacctgaatcggtatcttcggttctaaagacatttgggatttta
caggcactgagtacgcaaaaggacattggtatcagtgaattagctcaacggcttatgatg
tcgaagagcacagtttaccgtttcctacaaacaatgaagacactgggttacgtttctcag
gaaggggaaagtgagaactactccctgacgctgaaattgtttgaacttggcgcaagtgcc
ctagagtatgttgacctggttgacttggcagacattgaaatgcgccgtatttctgacctg
accaatgaagccctgcacttaggtgcgctggatggtgatggcatcatctacatccataag
atcgactctaaatacaaccttcgtatgcagtctcgaattggtcgccgcaatccgctacac
acgaccgcgattggtaaggtactgctagctgaacgagacgaagaagaaacgcgcaacatt
ctttcttttgttgaattcactaaatcaacggaaaacacccacgaagatgtggaatcactt
ctcgctgaacttcctcaggtaaaagagcagggatttggtgaagataacgaagaacaggaa
gttgggcttcgctgtcttgctgttcccgtttatgaccgattcaatcaggtaattgctggt
atgagtgtgtcactgccaacgattcgttttactgaagagaaaaaagtggaatacattgcc
gagcttcatgcggcagcagcgcgaatttctctcaagctaggttgcaaagcttacccgcac
ggaaagtaa
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