Vibrio nigripulchritudo: VIBNI_B1713
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Entry
VIBNI_B1713 CDS
T02871
Name
(GenBank) putative Transcriptional activator of acetoin/glycerol metabolism
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vni03000
]
VIBNI_B1713
Transcription factors [BR:
vni03000
]
Prokaryotic type
Helix-turn-helix
Other families
VIBNI_B1713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_30
HTH_8
Mg_chelatase
PAS_4
AAA_3
HTH_7
AAA_5
AAA_2
HTH_28
HTH_23
HTH_22
AAA_7
PAS_8
NUMOD1
HTH_10
Rok_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCO61443
UniProt:
U4KEE9
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Position
2:complement(1748296..1750191)
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AA seq
631 aa
AA seq
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MDEYKNNDRSHQSIIESSWRRCRDAGLAHSSTPVIEMASDADFTSSLDQHHGLLQTTQQK
VLPFYDNLLSNSNCLVMLADTNGQVLNSWGEQRFFQENQPHVFRHGVHWQEGLIGTNAIG
TALETGNIVQIFHDEHFLASNRFMTGSASPLFDADRRMTGVLAISSDTYMPTAHTLGMVK
LMSQAIENQLIVSRFNSDHYLFWFNTSEENIDSQWSCLLVFNEQGTIVSANRRAEVVLGC
DLALQNLDQLFDVRMDQLLAHPSYTPLVLRSKHNFNFHGIVMPPKIPQGRSLDFRNAPKP
AAKAVSKDDVLDLERLNMGDPRLSKAITQASKILNTDIPILINGETGVGKEVFVNALHLS
SERSQAPLIAVNCAAIPSELVESELFGYEKGAFTGAHTKGYIGLIRKADKGTLFLDELGD
MPLNVQARLLRVLQERKVTPLGSTTSYPVDFKLVSATNRHLKQDVEAGKFRQDLYYRVSG
LNITLPPLRERTDKDALVQYLLSKFSSGDQPGQISMEVLSLFKSHPWPGNIRQMVSVIQI
ALAMAEPEAIQVDDLPDDFLADVQSSTTSDSNIRPFVAPVNTSFQSQTTVEEKEDWLEAY
ERMNRNISKTAKELNISRNTLYKRLRESGLK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatataagaataatgatcgttcccaccagtcgatcatagaaagctcgtggcga
cgctgccgtgatgctgggctggcgcattccagtacgccagtcatagaaatggcaagtgac
gccgacttcacctcgtcactcgatcagcaccatggtttgctgcaaacgacgcagcaaaaa
gtgctgccgttttacgacaaccttctctctaacagtaattgcttagtgatgctggcagac
accaacgggcaggtgctgaacagctggggagagcaacggttctttcaggaaaatcagcct
catgtttttcgccacggtgtgcattggcaggaaggattgataggaaccaatgccattggc
acggctttagaaacaggcaacattgttcagattttccatgatgaacactttctcgcttcc
aaccgatttatgacaggctcggcttctcctttgtttgacgctgaccgccgaatgacaggg
gtgctggcgatatcaagtgacacctacatgcctacagcccatacgcttggcatggtgaag
ctgatgtctcaggctattgaaaaccagctgattgtttcccgctttaattctgatcactac
ttgttctggtttaataccagtgaagagaacatcgatagtcaatggtcctgtctgttggtg
ttcaatgaacaaggcaccattgtctccgccaaccgtcgggcagaagtggtgctgggttgt
gacttggcgcttcaaaatctggatcagctgtttgacgtacgcatggatcaattactggca
cacccttcttatacccctctggttctgagatccaaacataacttcaatttccatggcatt
gtgatgccaccgaagatcccgcaaggacgttcactggattttcgcaatgctccgaaacct
gctgccaaagcggtttcgaaagacgatgtactggatcttgaacgcctgaacatgggcgat
ccaaggctgtcgaaagccatcactcaagccagcaagatactgaacacggatattcccatt
ttgatcaatggcgaaaccggagtcgggaaagaagtgttcgtaaacgcgcttcacctttcg
agtgaacgctcacaagccccccttattgctgtgaattgtgccgcgattccttctgaactg
gtggaatctgaattgttcggatacgaaaaaggcgcgttcacgggcgcgcacaccaaaggg
tatatcggtcttattcgcaaagccgacaaaggaacgttgtttctggatgaattgggcgac
atgccactgaatgtgcaggcgcgtttattgcgcgtgcttcaggaaagaaaggtcacccca
cttggttcaacgacttcgtacccagtggatttcaaattggtgtctgccaccaaccgacat
ttaaagcaagatgtcgaagcgggtaagtttcgacaagatctgtactaccgcgtatcgggc
ttaaacattacgttgccaccgcttcgcgagcgtactgataaagacgctttggtccagtac
ttattgagtaagttttccagtggcgatcagccagggcaaatttctatggaggttttgtct
ctgttcaagtcgcacccttggccaggcaacatccgacagatggtcagtgtgattcagatt
gcactcgcgatggcagagccggaagcgattcaggtggatgacttaccggatgatttctta
gccgatgtacagagttcaacaactagtgactccaatattcgtccattcgtcgcgccagta
aatacgagttttcaatcccaaaccacggtagaagagaaagaagactggttggaggcgtat
gagcgaatgaaccgcaatatttcgaaaaccgccaaagagcttaatatcagtcgaaataca
ctttataaaagactgagagaaagtggtctgaaataa
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