Vibrio nigripulchritudo: VIBNI_B1750
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Entry
VIBNI_B1750 CDS
T02871
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vni
Vibrio nigripulchritudo
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vni03400
]
VIBNI_B1750 (phrA)
Enzymes [BR:
vni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VIBNI_B1750 (phrA)
DNA repair and recombination proteins [BR:
vni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VIBNI_B1750 (phrA)
Prokaryotic type
VIBNI_B1750 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CCO61478
UniProt:
U4KEH4
LinkDB
All DBs
Position
2:complement(1790572..1792011)
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AA seq
479 aa
AA seq
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MQIVWFRRDLRTIDNTALNQAVATGEPVVALFLATPQQWKSHNKAPIQADFLYRRLYELQ
RELHELNIPLLYQEVSMFADQVSMIRSLLRLETVNGVHANREYELNEQQRDRQIEALEIE
GKDVHFYHDKCVMPPRSVLNKQGEYFKVFTPFKRAWLAKVSMAGVTVSPRLKRANDAFPG
VGLLLNIVEEFNHKCHFTYPTEDSAAYAVDTESIIQKLRDFCRESASQYKDDRDLPAIEG
TSRLSPYLALGCLSPRQCIARLTYQENDRLKNFDELNEGEQTWLSELIWREFYQHLLEFE
PKLSKGLPFVDWSIDLEWHNDEDWLTRWKNGETGYPIVDAAMRQLNQTGWMHNRLRMIVA
SFLTKDLLIDWRKGEDYFMSKLIDGDYAANNGGWQWSASTGCDGQPYFRIFNPISQGEKF
DAQGEFICKWIPELKEVPQKFIHQPWNWTKRHTLDYPKPMVDHKTQREMALDMYKKAKG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgtatggtttcgtcgtgatctcagaacgatagataacaccgctctaaatcag
gcagtcgcgactggtgaacccgttgtggctctgtttttggcgacccctcagcaatggaaa
tcacacaacaaagcgccgattcaggcagattttctttatcgcaggttgtatgaattgcaa
cgagaactgcacgaactcaatattccgttgttgtatcaggaagtctcgatgttcgctgat
caggtttccatgattcgttctttgttgcgtcttgaaaccgttaatggtgtgcacgcgaac
cgcgagtatgaattgaacgagcagcaacgtgacaggcagatagaagctctcgaaatagaa
ggaaaagacgttcatttttatcacgacaaatgcgtcatgcctccgcgaagcgttctaaat
aaacagggcgaatacttcaaagtctttactccgtttaagcgtgcatggttagccaaagtc
tctatggccggtgtgactgtttcacccaggctgaagcgcgcaaatgacgctttccccggg
gtagggttgttgctcaatatcgttgaagaatttaatcataagtgccatttcacataccca
acggaagacagcgcggcttatgctgtggacaccgaatccatcatccagaaactgagagat
ttctgtcgcgaaagtgcttcccagtacaaagacgacagagacttgcctgccattgaaggc
acgagtcgtctttctccctatctggctttggggtgcctttctccaagacaatgtattgcc
cgcctaacctatcaggaaaatgacaggttaaagaactttgatgagctgaacgaaggggag
caaacctggctcagtgagctgatctggcgcgagttttatcagcatcttctcgaatttgaa
ccaaaactgagcaaaggcttaccgtttgttgactggagcattgaccttgagtggcacaat
gacgaggattggttaacacgctggaaaaacggtgaaacgggatacccaattgtggatgct
gccatgaggcagttaaatcagacagggtggatgcacaaccgcttaagaatgatcgtcgca
agtttcctgactaaggatttgctgatcgactggaggaaaggcgaagactactttatgtct
aaactgattgatggggactacgctgccaataatggcggatggcagtggtctgcatcgact
ggatgtgatggtcagccttatttccggatcttcaacccgatatctcagggggaaaaattt
gatgctcagggcgagtttatctgtaaatggatccctgaattaaaagaagtacctcagaag
tttatccatcagccatggaattggacaaagcgccacacactggactatcccaaacccatg
gttgatcataaaacccagcgtgaaatggcgttagacatgtataagaaagcgaaaggataa
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