Vibrio nigripulchritudo: VIBNI_B1924
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Entry
VIBNI_B1924 CDS
T02871
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+]
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00250
Alanine, aspartate and glutamate metabolism
vni00310
Lysine degradation
vni00350
Tyrosine metabolism
vni00650
Butanoate metabolism
vni00760
Nicotinate and nicotinamide metabolism
vni01100
Metabolic pathways
vni01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VIBNI_B1924 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VIBNI_B1924 (gabD)
00310 Lysine degradation
VIBNI_B1924 (gabD)
00350 Tyrosine metabolism
VIBNI_B1924 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
VIBNI_B1924 (gabD)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
VIBNI_B1924 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
VIBNI_B1924 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
VIBNI_B1924 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
CCO61642
UniProt:
U4K8F4
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Position
2:complement(1972646..1974091)
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AA seq
481 aa
AA seq
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MKLQNMDLFKQLCYVDGNWVGEAAEQQPVYNPATGQKIGQVPVFGREEAEQCIAKANLAQ
KEWRSLTAKARSNLLKKWFELIQENSDDLATIITTEQGKSIHEAKGEVAYAASFIEWFAE
EAKRAYGETIPSHKPDARIVVTKEPVGVVGAITPWNFPAAMITRKCGPALAAGCTVVLKP
APDTPFTALALGALAEEAGIPPGVFNVLTGDAAGIGGAFTDSKIVRKVSFTGSTQVGKLL
MSQSSGSVKKLSLELGGNAPFIVFEDADLDAAVQGTLIAKLRNAGQTCVCANRIFVHRSV
QENFVSKLKAAFETLKVGDGLNPDNQIGSMINQAGLDKVYDHLNDALEKGANLVLGSKEK
PTNLFCSPMIVTGMTDDMRVAHEETFGPLAAIFTFDTEEEVIERANQTDAGLAAYFYSQS
LRRSWQVSEQLEAGMIGINEGLISTEVAPFGGVKESGLGREGARQGIEDYLETKYMLMGG
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgcaaaatatggatttgttcaaacagctttgttatgtcgatggaaactgggtc
ggagaggcggctgaacaacaacccgtgtacaacccggcaacgggtcaaaagattggtcag
gttcctgtttttggcagagaagaagcggagcagtgcattgctaaagctaacctggcacag
aaagagtggcgctctcttactgccaaagcgcgcagcaacctgcttaagaagtggtttgaa
ctgattcaggaaaacagtgacgatctcgccaccatcatcaccacagaacaaggtaaatcc
attcacgaagcaaaaggtgaagtcgcatacgcggcgagctttattgaatggtttgctgaa
gaagccaagcgtgcttacggagaaactatcccttctcacaagccagacgcccgaattgtg
gtgactaaagagccagtgggagtcgttggggcgataaccccatggaatttccccgctgcg
atgatcacaagaaaatgcggtcccgctttagcggcaggctgcaccgttgtactcaagccc
gcgcccgatacgccatttacagctttggcgctaggcgcgttggctgaagaggctggcatt
ccacccggtgttttcaacgtccttactggtgatgcggcaggcattggtggagcattcacc
gacagcaaaatcgttcgcaaagtctcgtttaccggatcaactcaagtaggcaaactgctg
atgtctcaatcgtctggttcagtgaaaaaactctctttagaattgggcggcaacgcgcca
ttcattgtttttgaagacgcagatttagatgctgcggttcagggaacattgattgccaag
cttcgaaatgcggggcaaacctgtgtctgtgcgaatcgtatatttgtccatcgatcggtt
caggaaaacttcgtctccaaacttaaggcggcgtttgaaacgcttaaagtgggtgatggt
ctcaaccccgataatcagattggttcgatgatcaatcaagcgggactggataaggtttat
gaccatttaaacgatgctttggaaaaaggggcaaacctggttctgggctctaaagaaaag
ccgaccaatctgttttgttctcctatgatagtgaccggaatgaccgacgatatgagggtt
gctcacgaagaaacctttggaccgcttgcagcaatctttaccttcgatacggaagaggaa
gtcatagagcgcgccaaccagacagatgcggggttggcggcttacttctattctcaatcc
ctaagacgaagctggcaggtttcagagcagctagaggcaggcatgataggaatcaacgag
ggtttgatctcaacagaagttgctccatttggtggtgtaaaagagtcggggcttgggcgc
gaaggcgcgcgtcagggtatcgaagattatctcgaaaccaagtacatgttaatgggtggg
gtgtag
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