Veillonella nakazawae: VEIT17_03250
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Entry
VEIT17_03250 CDS
T06972
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
vnk
Veillonella nakazawae
Pathway
vnk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VEIT17_03250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnk03019
]
VEIT17_03250
Messenger RNA biogenesis [BR:
vnk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VEIT17_03250
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_3
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBU33879
UniProt:
A0ABM7HA42
LinkDB
All DBs
Position
380504..381679
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AA seq
391 aa
AA seq
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MNIIIHRGTHQIGGSAIEISTASTRIILDFGNELSLDEKYIPINLDIDGVTKGMPDCDGI
VISHYHIDHLGQLTSALPEIPLYMGKLSKEVAMIATEHQDKDLYLRLLGANTFRGGEAFT
IGNIHIRPLVIDHSAVDSYMFVIEAEGKRVLYTGDFRMHGLRSHIVEKLVKTYIGEVDVL
ITEGTLVSRGVNDGISEAAVLEDIYSYIQDGKYVFVICSSTNIDRIMGIWQNMPTDKVLI
CDAYQKRILDTVVNNVYYESSLYRRHDSPLVLDKGKYPKYYMDNGFVCLVRATENHISHI
KEFPKDDVRIIYSMWTGYIEENLALKALLETYPTYICHASGHVSKDDLIKFIELVNPDVI
IPVHTDNPERLEALVPNRNVYIVNDNEPFII
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaatataattatccatcgtggcactcatcagattggtggcagtgccatagaaataagt
acagcatctactcgtattatattggactttggtaacgaattaagtttagatgaaaagtac
atacctataaatttagatatagacggtgttacaaaagggatgccggattgtgacggtatt
gtgatttctcattatcatatagatcacttaggacaactaacctctgcattaccagaaata
ccattatatatggggaaactgagtaaggaagtggctatgatagcaactgaacatcaagat
aaagatttatatttacgtttgttaggtgcaaatacatttcgtggaggcgaagccttcact
attggaaatatacatattagacctttggttatcgaccatagtgctgtggatagttatatg
tttgtcattgaagcagaaggtaaacgtgtcttatatacaggtgatttccggatgcatggg
ttgcgtagtcatatagtagagaaattagttaaaacctatataggtgaggttgatgtatta
attacagagggaacattagtatctcgtggtgttaatgatggtatatctgaagctgctgtg
ttagaggatatttattcgtatatccaagatggaaaatatgttttcgttatatgttcatct
acgaatattgaccgtattatggggatttggcagaatatgccgactgataaagtactaatt
tgtgatgcatatcagaaaagaatattagatactgtggttaataatgtatattatgaaagt
tctttgtatcgtagacatgatagtccgctagttcttgataaaggcaaatatcctaaatac
tatatggataacggctttgtatgtttagtaagagcaacagaaaatcatatttctcacata
aaagagttccctaaagatgatgtacgtataatatattctatgtggacaggatatattgaa
gaaaacctagcattgaaagctttgttagagacttacccaacctatatatgtcatgccagt
ggtcatgtgtctaaagatgatttgattaagtttatagaattagttaatcctgacgttatt
attccggttcacactgataatcctgagagattagaggcattagtacctaatagaaatgtg
tatatcgttaatgataatgagccatttatcatataa
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