Veillonella nakazawae: VEIT17_05870
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Entry
VEIT17_05870 CDS
T06972
Symbol
rluD1
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
vnk
Veillonella nakazawae
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vnk03009
]
VEIT17_05870 (rluD1)
Enzymes [BR:
vnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VEIT17_05870 (rluD1)
Ribosome biogenesis [BR:
vnk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VEIT17_05870 (rluD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-ProteinID:
BBU34141
UniProt:
A0ABM7HAU9
LinkDB
All DBs
Position
678447..679370
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AA seq
307 aa
AA seq
DB search
MNEYIVNAEQDGMRLDVFLTEHMEGSRSYIQSLIKGGHVTVGAKVGKANLRLTPNAVVRV
EIPEPESVEVKPEDIPLDVLYEDHDIIIVNKQRGMVVHPAVGNYSGTLVNALLYHCKDLS
GINGEIRPGIVHRLDKDTSGVMMAAKNDAAHIGLAEQVKEHSAKRTYLALVQGNIVEEKG
TIKAPIGRHPKDRMKMAVVFENSKDAVTHFNVVERFGHQTLVECNLETGRTHQIRVHFAH
IGHPVVNDPFYGYRRMDFPIEGQALHSKSLDVKHPITGESMHFEAPLPDDFKACIEFAKT
YREDKRK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatatattgtaaatgctgagcaagacggtatgagactggatgtattcttaaca
gaacatatggaagggtctcgtagttatattcaaagtttaattaaaggtggtcacgttaca
gtaggtgctaaggtagggaaagcaaatcttagacttacaccaaatgctgttgtacgtgta
gagataccggagcctgaatctgtagaggtaaaaccagaggatattcctttagatgtattg
tatgaagatcatgatattattattgtaaataaacaacgtggtatggttgttcatcctgcg
gtgggcaattattcgggtacacttgttaatgcattgctatatcattgtaaggatttgtcc
ggtattaatggtgagattagacctggtattgttcaccgtttagataaggatacatctggt
gttatgatggctgctaaaaatgatgcagctcatataggtttagcggagcaggtaaaggag
cattctgctaaacggacatatttagcattagtacaaggtaatattgtagaagaaaagggt
actattaaagctcctattggaagacatcctaaggatcgtatgaaaatggctgttgtcttt
gaaaatagtaaggatgcagtcactcactttaacgtggttgaacgatttggccatcaaacc
ttggttgaatgtaatttagagactgggcgcacacatcaaattcgtgtacattttgctcat
attggacatcctgttgttaatgatccgttctatggctaccgtcgtatggacttccctatt
gaaggacaggcattgcactctaaatctttagatgtaaaacatcctattacaggtgaaagt
atgcattttgaggcgcctcttccagatgacttcaaagcatgtatagagtttgctaaaaca
tatcgagaagataaacgaaaataa
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