Veillonella nakazawae: VEIT17_08660
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Entry
VEIT17_08660 CDS
T06972
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vnk
Veillonella nakazawae
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnk03032
]
VEIT17_08660 (topA)
03400 DNA repair and recombination proteins [BR:
vnk03400
]
VEIT17_08660 (topA)
Enzymes [BR:
vnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VEIT17_08660 (topA)
DNA replication proteins [BR:
vnk03032
]
Prokaryotic type
DNA Topoisomerases
VEIT17_08660 (topA)
DNA repair and recombination proteins [BR:
vnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VEIT17_08660 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
YyzF
Motif
Other DBs
NCBI-ProteinID:
BBU34420
LinkDB
All DBs
Position
982682..985081
Genome browser
AA seq
799 aa
AA seq
DB search
MSIKRSIVIGEPKVASTSKDTKKKSTKKESTTIKRKVAKEALTPMGIVRDKSVLQTSVPP
EQREPRVYNPDGKVLVIVESPAKSKTIEKFLGPNYVVKASMGHLRDLPKSQMGIDIEHDF
TPRYSNLVTRKKVIDELVSYADESSAVLLATDPDREGEAISWHLAYILNVDPTSTCRITF
NEITKNAVAEALESPRTIDMNMVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSV
AVRLICEREREIQAFVPQEYWTIEGNFETPKKEAFTAELTHIKGEKIDITTESEAQAVVD
AIGGADAVVTNIEKRKRSRKAAPPFTTSTLQQDGVRKLNFGAKRTMMIAQHLYEGLEIGS
YGHVGLITYMRTDSTRISKEMQVMAKDYIIRNYGEDYYPSKPNMYGAKGSAQDAHEAIRP
TSLELTPKMVEPFLSRDELKLYTLIWNRFMASQMAPQQNESTTIELTVHDDYTFKATGSR
VIFPGFSAVYEDAKKEDVPQLPALKKNDAAHTVEVLPEQHFTQPPPRYSEASLIKTLEEL
GIGRPSTYAPILDTIVSRNYVENTNKQFIPTELGFVVVDFLIAYFEKIINTGFTRDLEEE
LDAIASGKDTYLKVLSDFYEVFAKELEDASDVDRIEIASMESDETCELCHSPMVYKFGRY
GKFLACSNFPECKNTKPITVGTGVTCPKCKDGEIVERKSRRGRLFYGCNRYPQCDFTLWD
KPTHEFCETCGSIMVEKTYKNGTTKKFCSNETCPTRPPKKTRKKKSEASEETVKESKESE
KSKESKKSSKAKKEETTVE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
ttgtccattaaacgatcaatcgttattggcgagccaaaagtagctagtactagtaaagat
actaaaaagaaaagtactaagaaagagagtactacgataaagcgtaaggttgctaaagaa
gcccttactcccatgggaattgtacgagataaatctgtactacaaacgtccgtaccacca
gagcaacgggaaccacgcgtttataatcctgatggcaaagtgttggttatcgtagagtct
cctgctaaatctaaaacaattgaaaaattcttaggtcctaactatgttgtaaaggcgagt
atgggccacttacgagatttgccaaagtctcaaatgggcatcgatatcgaacatgatttt
acgccccgttatagcaatttggtaactcgtaaaaaggttattgatgaactcgtttcctac
gccgatgaaagcagtgccgtattgctcgcaactgaccctgaccgcgaaggagaagctatc
tcttggcatttagcgtacatattaaatgtagatcctacatctacatgtcgtattacgttt
aatgagattactaaaaatgccgtagcagaggccttggaatctccacggactatcgatatg
aacatggttgatgcccaacaagcacgccgtgtattagaccgtatcgtaggctataaattg
agtcctttattatggaaaaaggtttgtaaaggcctcagtgcaggtcgtgtgcaatccgtt
gcagttcgacttatctgtgaaagagagcgagaaattcaagctttcgtgccacaagaatat
tggaccattgaaggcaattttgaaacgcctaaaaaagaggctttcacagcagaattgact
catattaaaggtgaaaaaatcgatattactactgaaagtgaagcgcaagccgtagtagat
gctattggcggagccgatgcagtagtgacaaatattgaaaagcgcaagcgttctcgtaag
gcggcacctccctttacaacgtctacgttgcaacaagatggtgtgcgtaaattgaacttt
ggtgcgaagcgtaccatgatgattgcacaacatctttacgaaggtcttgaaatcggttcc
tatggccacgtaggtttgattacgtacatgcgtacagactctacgcgtatctctaaagag
atgcaggtcatggctaaggactatattattcgtaactatggtgaagattattatccttct
aaacctaatatgtatggtgcaaaaggttctgctcaagatgcgcacgaagcgattcgccct
acatctttagagttaacacctaaaatggtagagcccttcttgagtcgtgatgagcttaag
ttatatacattgatttggaatcgttttatggcgagccaaatggcaccacaacaaaatgaa
tctacaactattgaattgactgttcatgatgattacacatttaaagcgacaggatctcgt
gttatcttccctggttttagtgccgtttatgaagatgcgaaaaaagaggatgttcctcaa
ttgccagctcttaaaaagaatgatgctgctcatacagtagaggtattgcctgaacaacat
ttcacgcaaccacctccacgttactctgaggcgagtcttatcaaaacactagaagaacta
ggtattggtcgtcctagtacgtatgcaccaattctggatactatcgttagtcgtaactat
gtagagaatacgaataaacaatttattccaacagagctaggctttgtagtggtagacttc
ttgatagcgtactttgaaaaaatcatcaatacaggttttacacgagaccttgaagaagag
cttgacgctattgcgtccggtaaagatacatatctaaaggtattgtctgatttctatgaa
gtattcgctaaagagctagaagatgcgagcgatgtggatcgcatcgaaattgcatctatg
gaaagtgatgaaacgtgcgaactctgtcatagcccaatggtatataaatttggtcgctat
ggtaagttccttgcatgttctaacttcccagaatgtaaaaatactaaacctattacagta
ggtacaggtgtaacttgccctaaatgtaaggatggggaaatcgtagagcgtaagtctcgt
cgtggtcgtctattctacggctgtaatcgatatccacaatgtgactttacattatgggat
aaaccaacccatgaattctgtgaaacatgtggttctattatggttgaaaagacatataaa
aatggtacaactaaaaagttctgttccaatgaaacatgtccaactagaccaccaaagaaa
acaagaaagaaaaaaagcgaagctagtgaagaaactgtaaaagaatctaaagaatctgaa
aaatctaaagaatctaaaaagtctagcaaagctaaaaaagaggaaacaacagttgaataa
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