Veillonella nakazawae: VEIT17_16570
Help
Entry
VEIT17_16570 CDS
T06972
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vnk
Veillonella nakazawae
Pathway
vnk03420
Nucleotide excision repair
vnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VEIT17_16570
03430 Mismatch repair
VEIT17_16570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnk03400
]
VEIT17_16570
Enzymes [BR:
vnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VEIT17_16570
DNA repair and recombination proteins [BR:
vnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VEIT17_16570
MMR (mismatch excision repair)
Other MMR factors
VEIT17_16570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
DEDDh_C
AAA_30
ResIII
Viral_helicase1
DEAD
DNA_pol_A_exo1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBU35211
LinkDB
All DBs
Position
complement(1825591..1828179)
Genome browser
AA seq
862 aa
AA seq
DB search
MLINREQQRVIDEVEQNILLLASAGTGKTNTLAYRVAHLIEGGYAKAENILCLTFTNKAA
NEMKDRIQSLVGSPAKAVEVSTFHSFCFFVLQQEGKRNETLYTDVTIFDEEDCKELSEPY
RPGKLREMSFANIIGMVKEYRSLYGFYSDDLVGDYKRTIERLQKEQRPAIEQQFSSFGNV
LYSELHDFLNHGHEWIAAYDESLASVHGLDFTDLICGVHRLFQDPVVRERWRSRYSYISV
DEMQDTGVLEYKVLEMLWEGNHVLLCGDYFQTIYEWRGSDPFRLLKQFDADFKPLKIIFY
ENYRSNWTLFTMAFKTLQNMFPDLVGSIYTELPRANSERKGKPVLIKGCKNSYLEGRYIY
EAICALPKDANIGVLVRDNKKAQRLSDSFERLNNEKPEDERRHFMIIDEFKFFRRQEIKD
VMAYFKLLMNPNDSVSAKRIIKRYVAGIGDARIAAIESPETRQVGLKLTDFMDMPIFEAE
PYAKLVSGLENHEVVVYDVESTGTDTSQDRIIQIAAIRIDENGQVLETFERFINPGVPVG
QSEEVHGFSDAYLQEHGEEPAIVLQAFKEFSKNAIIVGHNVNYDVTIFTNELARHNLGNP
EFKAIYDTLDIYRRFYPNLPNHKLGFLASEFPINHEPTHNAMDDILATAQLLIYAVKENI
VPTTTGRMVAINKYKAAFTNIASQMATLRRKAYTELPTKLLAYIMNQMGVLEYYKSHGEA
AKVEHIRDLYRIMEKLDAAYEGPAGLARLNQILQMAALTAGEPAQQVRNEDRIPIITIHQ
AKGSEFDHVFLAGLNEGTFPSPFAIAEGREDEEKRLFYVAITRPKQELTITFEQTNIRGR
AVQPSSLLNYMPRDNELVERRY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcaatcgtgaacaacaacgcgttattgatgaagttgaacagaatatcctcttg
ttagcgtccgctgggacgggaaaaacgaatacacttgcttatcgagtggctcacctcatc
gagggcggctatgcgaaggcggagaacatcttgtgcttgacctttacgaataaggcggca
aacgagatgaaagaccgcattcaatcgctcgtaggcagtcctgcaaaggctgtggaggtt
agtacattccacagcttttgctttttcgtgctccaacaagaggggaagcgcaatgaaacc
ttgtatacggatgtaactatctttgatgaagaggattgcaaagaattgtctgaaccgtat
cgtccaggtaaattgcgagaaatgtcctttgccaacatcatcggcatggtaaaagaatat
cgctccttatatggcttttattctgatgatctcgtaggcgattataaacgaactattgag
cgtttacaaaaggaacaacgtcctgctattgagcaacagttctctagctttggcaatgtt
ctttatagtgaacttcatgacttcttgaaccatggtcacgaatggattgctgcctatgat
gaaagcttagcctccgtacatggtctagattttacggaccttatctgtggtgttcatcgt
ctattccaagaccctgtagttcgggagcgttggcgtagccgttatagctatatctctgtt
gatgaaatgcaagacacaggtgtactagagtacaaggtacttgaaatgctgtgggaaggt
aatcacgtcctattatgtggtgactattttcaaaccatttacgaatggcgtgggtctgat
ccattccgtttgctcaagcagtttgatgcggactttaagccgttaaaaatcattttctac
gaaaactaccgctctaactggacgctctttacgatggctttcaaaacattgcagaatatg
ttccctgatctggtaggctctatctatacggaattgccccgcgccaatagtgaaagaaag
ggtaagcctgttctcataaaaggctgtaaaaatagctatcttgagggcagatatatctat
gaagctatctgcgccttgccaaaggatgctaatattggcgttttagtgcgggataataaa
aaggcgcaacggctgagcgactcctttgaacgcctcaacaatgaaaagcctgaagacgaa
cgccgtcactttatgatcattgatgagtttaaattctttagacgccaagaaatcaaagac
gttatggcttactttaaattgcttatgaacccgaatgactccgtcagcgctaagcgtatt
ataaaacgctatgttgccggcataggtgacgcgcgtatcgccgctattgaaagccctgaa
acacgtcaagtaggcttaaaattgacggattttatggatatgcctatctttgaggcagag
ccttatgcgaagctcgtcagtgggttagaaaatcatgaggttgtggtgtatgacgttgaa
agtaccggtactgatacgtcacaggatcgtattattcaaattgcggccatccgcatcgat
gaaaatggacaggtcctagaaacatttgaacgctttatcaaccccggcgtacctgtggga
caatccgaagaggtacacggcttctctgatgcgtatttacaagaacacggcgaagagcca
gctatagtgctacaagcctttaaggaattctccaagaatgccattattgtaggacataat
gtaaactacgatgtgactatctttactaatgaattggcacgccataatttaggtaatcca
gaattcaaggctatctacgatacactcgatatttaccgtcgtttctatcctaatttgcca
aatcataaactgggcttcctagcatcagagtttcctatcaatcatgagcctacgcacaat
gcgatggacgatatcttggctacagcacagcttttaatttatgcagtaaaagaaaatatc
gtgcctacaacgactggtcgtatggtggcaatcaataagtataaggctgctttcaccaat
attgcgtcccaaatggcaacgttacgtagaaaggcctatacggaattgccaacgaagtta
ttggcgtacataatgaatcaaatgggggttctagaatactataaatcccatggggaagcg
gcaaaggtagagcatatacgggatctatatcgcatcatggaaaaactagatgcagcctat
gaagggccggctgggttagctcgattaaatcaaatcttgcagatggcggcccttaccgca
ggtgagcccgctcaacaggtacgaaatgaagatcggattcctatcattaccatccaccaa
gcaaaggggagcgagtttgaccatgtattcctagcaggccttaacgaaggtaccttccca
agcccgtttgccattgcagaaggccgtgaagacgaagaaaagcgcttgttctatgtggcc
ataacgcgccctaagcaagagctgaccattacctttgaacaaacgaatatacgtggtcga
gcggttcaaccaagctcgctactgaactatatgccacgagacaatgagctcgtagaaagg
agatactaa
DBGET
integrated database retrieval system
