Vibrio neocaledonicus: D3H41_00015
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Entry
D3H41_00015 CDS
T06228
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3H41_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnl03400
]
D3H41_00015 (recF)
DNA repair and recombination proteins [BR:
vnl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D3H41_00015 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_27
AAA_29
ABC_tran
AAA_16
cobW
AAA_22
DUF7432
DUF2813
UPF0738
Motif
Other DBs
NCBI-ProteinID:
QCO84587
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All DBs
Position
1:2581..3660
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AA seq
359 aa
AA seq
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MPLSRLIIQQFRNIKACDIELSAGFNFLIGPNGSGKTSVLEAVYLLGHGRSFKSSLTGRV
IQNECDELFVHGRFLNSDQFELPIGINKQRDGSTEVKIGGQSGQKLAQLAQVLPLQLIHP
EGFDLLTDGPKHRRAFIDWGVFHTEPAFYQAWGRFKRLNKQRNALLKTANSYRELSYWDQ
EMAGLAENISQWRASYIEQMKTVAETICQTFLPEFEIQLKYYRGWDKDTPYHEILEKNFE
RDQALGYTFSGPNKADLRIKVNGTPVEDVLSRGQLKLMVCALRVAQGQHLTEMAGKQCIY
LIDDFASELDSQRRKRLADCLKETGAQVFVSSITESQIADMLDDNGKLFHVEHGRIESN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttctcgtctcatcattcagcagtttcgaaacattaaagcctgtgatattgag
ttatcagcaggctttaactttcttatcgggccgaacggcagcggtaaaaccagtgtctta
gaagcggtttatctgctcgggcatggccgctcattcaagagctctctcaccggacgagtg
atacaaaatgagtgtgacgaactgtttgttcatggtcgttttttgaactcggatcaattt
gagctacctatcggcattaataagcagcgtgatggctcaacagaggttaaaataggcggt
caatctggacaaaaattagcgcagttggcacaagttctgcctctgcagttgatacaccca
gaagggtttgatttactgacagatggccctaaacatcgtcgtgcgtttattgattggggc
gtgtttcataccgagcccgctttttatcaagcatggggaaggttcaagcgcctgaacaag
cagcgcaacgcgttgttgaaaaccgccaatagttatcgtgagctcagttattgggatcag
gaaatggcagggttggctgaaaacatcagccaatggcgagcaagttacatcgagcagatg
aaaaccgtcgcagaaactatctgtcagacatttttgccagaatttgagatccaattgaag
tattatcgtggctgggataaagacactccataccacgagatactagaaaagaattttgag
cgtgatcaggcattgggatacacctttagtggcccaaacaaagctgatttgcgcattaaa
gtgaacggaacgcccgttgaagatgttctgtcacgcggtcaattaaaactcatggtgtgt
gcattgcgtgtagcgcaagggcaacacctgacagagatggccggtaaacaatgcatttac
ctaattgatgacttcgcgtcggaattagatagccaacgtcgcaagcgtcttgctgactgc
ttaaaagagacgggcgcacaagtatttgtaagctctatcactgaaagccaaatcgccgat
atgttggacgataacggtaaattgtttcatgtggaacatggcaggatagagtcaaactag
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