Vibrio neocaledonicus: D3H41_00220
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Entry
D3H41_00220 CDS
T06228
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_00220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_00220
Transporters [BR:
vnl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D3H41_00220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
AAA_22
PRK
RsgA_GTPase
AAA_16
TniB
AAA
nSTAND1
AAA_23
Mg_chelatase
AAA_5
MeaB
AAA_19
DUF87
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QCO84616
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Position
1:44608..46323
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AA seq
571 aa
AA seq
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MSLLEVKNLRIEYPSRHGVHAAVKSLSFHIERGEIVGVVGESGAGKSTVGNAVIDLLSPP
GRVASGDVFLDGEKISGLSPEAMRKVRGSKIGFIFQDPMTSLNPLFTVEQQLKETIHANM
KVSDEEAYQRALSLMQQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP
TTALDVSIQDQILNLIRELCIKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK
VLGDPDHSYTRSLISAVPRSDRKLDRFPLVSYIEEAAEMEPLDIKNHWLGQSQDEREYTG
PLLDVKNVNLRFVTKDSLFESRREYVQASNNVSFEVHEGETFGLVGESGSGKSTIARVIA
GLYQPNSGQVKFEGIDLTALTSEKERRPMRRQMQMVFQNPYTSMNPRMKVFDIIAEPIRF
HKLTKNESETRQIVNDLLDHVGLGRMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE
PTSALDVSVQAQILNLLKDLQSELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE
QLFTAPQHEYSKKLISLMPEFTGLREEIETA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcactattagaagtgaaaaaccttcgtattgaatacccatcccgacacggcgttcac
gctgccgtgaagtcactttcttttcatattgaacgtggtgaaatcgtgggtgttgttggc
gaatcaggtgcgggtaaatccaccgttggtaacgctgttatcgatttgcttagtccccca
ggtcgcgttgctagcggtgatgtattcttggatggagaaaaaatttctggcctatcacca
gaagcgatgcgtaaggttcgcggctcgaaaataggttttattttccaagatccgatgacc
tcgctcaatccactttttactgttgagcaacagctgaaagagacgatccacgctaacatg
aaggtctctgatgaagaggcgtatcagcgcgcgctttctcttatgcagcaggttggtatt
ccgcaaccagaaaaccgcttaaaacagtacccgcaccaattctctggtggtatgcgtcag
cgtgttgtcattgctattgctttggctggtgagcctgatctcatcatcgcggacgaacca
actacggcgttagacgtttctatccaagaccaaatcctcaacttgatccgcgagctgtgt
atcaagaacaatgtcggctgtatgttagttactcacgatatgggtgtcgtctccaacgtc
accgatcgcgtggcggtaatgtatcgtggtgacttggtggagtttggaccaacagccaaa
gtattgggcgatcctgatcactcttacactcgcagtctaatttcagcggtaccacgttca
gacagaaagttagatcgtttcccgttagtaagctatatcgaagaagcggcggaaatggag
ccactcgatatcaagaaccactggttaggacaaagccaagatgagcgtgagtacactggc
ccgcttttggacgtgaagaacgtcaatcttcgctttgtgaccaaagactctttgttcgag
agccgccgagaatacgtgcaagcatctaataatgtgagctttgaagtgcacgaaggcgaa
acctttggtttggtgggcgagtctggttcaggtaaatcgaccattgcacgtgtgattgct
ggtttataccaacctaactctggtcaggtgaaattcgagggcattgacctgaccgcttta
acctctgagaaagagcgccgcccgatgcgtcgtcaaatgcagatggtgttccaaaaccca
tatacttcaatgaaccctcgtatgaaggtattcgatattattgctgagccaatccgtttc
cataaattgacgaaaaacgagtcggaaactcgccaaatcgtgaatgacctattggatcat
gttggtttgggtcgaatggctgggcttaagtaccctcatgaattctccggtggtcagcgt
cagcgtatttctattgcgcgtgcgttggcgactcgtcctcgacttttgatttgtgatgaa
ccgacctcagcactggacgtatcggtacaggcacaaattctaaacttgctgaaagatctg
caaagtgagctgaacttgactatgttgtttattagccacgatttacctgttattcgtcag
atgtgtgaccgagtaggtgtgatgcaaatgggtacacttttagaagtggcaccaacagaa
cagttattcacggcacctcaacacgaatacagcaaaaaattgatttctctgatgccggag
tttactggcttgcgagaagagatcgaaacggcataa
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