Vibrio neocaledonicus: D3H41_00275
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Entry
D3H41_00275 CDS
T06228
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_00275
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D3H41_00275
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_3
HTH_24
Sigma70_r4
HTH_23
HTH_Tnp_ISL3
TetR_N
Hpr_kinase_N
DUF218
HTH_Crp_2
HTH_7
HTH_IclR
HTH_11
Piezo_TM1-24
Motif
Other DBs
NCBI-ProteinID:
QCO84627
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Position
1:59147..60223
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AA seq
358 aa
AA seq
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MSLSAESLFVIMLLVTLLINHIFMAQQNKKTRTTLQDVADQVGVTKMTVSRYMRNPESVA
EKTRAKIATAIEEMGYIENRAPAMLSKSSSKAIGILLPSLSNQIFASFVQGIEMVTKANG
YETLLAHFSYDELEEERKIASLLSYQVDGLILTESHHTPRTLQMIKNAGIPVVETMELPS
EPIDMAVGLDHEDASYTVVKQMLDTGKRTIVYFGARLDTRTKLRMQGYDRAMTEAGLEPK
HVLTGDHSSFSLAHDLLERALETHPTLDGVFCTNDDIAIGTMLSAQQRGIQVPQKLAVAG
YNALDIGQTISPKLTSVDTPRFQIGVKSAELLIARLKGETQEEKVFDMGYQITSGESV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ctgagcttgtcggcagagagtctattcgtcataatgttacttgtaacattactgataaat
cacatatttatggctcaacagaataagaaaactcgtacgacattgcaggatgtcgcagac
caggttggcgtcacgaagatgaccgtttcacgctatatgcgtaaccctgaatcggtggca
gaaaagactcgggccaagattgcgactgcgattgaagagatgggttacatcgaaaaccgt
gcaccggcgatgttgtcaaagtcctccagtaaagccattggtattttactgccgtctttg
tccaaccaaatttttgcttcctttgttcagggcatagagatggtgaccaaagccaatggc
tatgagacgcttttagcgcattttagctacgatgagcttgaagaagagcgcaagatcgcg
tcattactctcttatcaagtcgatgggcttattctaactgaaagccatcacacgccgcgt
acattacagatgatcaaaaatgcgggcattccggtggtcgaaaccatggaactgccatcg
gagccgattgatatggcggttggactcgatcatgaagatgcgtcgtacaccgtggttaag
cagatgctagatacggggaagcgtacaatcgtctattttggcgcgcgtctggatacgcga
accaaattgcggatgcaaggttacgatcgcgcgatgacagaagcagggctagaacccaaa
catgtattaactggtgatcattctagtttttctttagcgcatgatttgctcgaacgcgca
ctggaaacgcacccaacgctcgatggggtgttctgtaccaacgatgacatcgcaattggc
accatgctgagtgcgcagcaacgtggcattcaagttccacagaaattggcagtggcgggc
tataacgcgctggatatcggtcaaaccatcagcccgaaactgaccagcgttgatacaccg
cgtttccaaattggtgtaaagagcgcagagctattaattgcgcgcctgaaaggcgaaacg
caagaagaaaaagtcttcgatatggggtatcagatcacgtcgggagagagtgtttaa
DBGET
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