Vibrio neocaledonicus: D3H41_01170
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Entry
D3H41_01170 CDS
T06228
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00541
Biosynthesis of various nucleotide sugars
vnl00552
Teichoic acid biosynthesis
vnl01100
Metabolic pathways
vnl01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D3H41_01170
00552 Teichoic acid biosynthesis
D3H41_01170
Enzymes [BR:
vnl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
D3H41_01170
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding
KR
adh_short
PglD_N
NAD_binding_4
DUF2070
Motif
Other DBs
NCBI-ProteinID:
QCO84793
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Position
1:240110..242056
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AA seq
648 aa
AA seq
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MQRLQFIWQLSRTHKRIVSVLIDVVLISLSFHLAILVRSGETNYFTYPTVWGIQIGVAIV
TIAVFARLGLYRAVLRYLTFQALFVVTAGAIISATLVAALSFYMSDPFPRTVPVIYAAFL
ALFCGGPRVIVRSLIAQSYSAQSKEVLIYGAGSGGRQLAMALRSSGDYRVRAFIDGDSTL
CNTMILGLPVIAIEDAMPIINKYDVAQVLLAVPSAKRSRRKIILDELAKLPVEVLTVPDM
TDIVSGKAKIDELKDVAIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQI
VEQSPKSIILFELSEFGLYQIDRELNQLKIEKELTCDIIPLLGSVQRQHRLETTMSSFKV
QTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLISTDKAVRPTNVM
GTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTH
PEITRFFMTIPEAAQLVIQAGAMGKGGDVFVLDMGESVKITDLASNLIQLSGLEVKSEAN
PHGDIEIQFSGLRPGEKLYEELLIGDNVKQTAHERIMTAHEVHLPLEEYELLLSELDFAC
HSMDHENIRTLLLNAPTGFNPTDGIGDLVWSHNQLELNLVHTELVVNE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtctacaatttatatggcagctttctagaacgcataaaagaattgtcagtgtt
ctgatcgatgtagttctgatctctttgtcttttcatttggcgatattagttcgctcaggt
gaaaccaactacttcacatatcctactgtttgggggattcaaattggcgtggcgattgtt
acaattgccgtctttgctcgacttgggctctacagagcagtgcttcgttacttaacgttt
caggctctgtttgtcgtgactgctggcgccattatatccgcaacgcttgtggcagcttta
agtttctacatgagtgacccattcccaagaacggttcctgttatttatgctgcgtttctt
gctcttttttgtggtggccctcgcgttatagtccgctctttgattgcacagagctactct
gcacagagcaaagaggttcttatttatggcgcgggatccggtggccgacaactcgcaatg
gcattgagaagtagtggggactatcgtgtaagagcgtttattgatggcgattcaacacta
tgcaatacaatgattttgggcttacctgttattgctattgaagatgcaatgccaattatt
aataaatacgatgttgctcaagtcttactcgcggtacctagtgctaaacgttctcgtcgt
aagatcattcttgatgagttggcgaaactgcctgttgaagtgcttactgttcctgatatg
acggatattgtctctggcaaagcaaaaatcgatgagctgaaagatgttgctattgaagat
ttacttggacgagatccagtcgccccacagcaagtattgttggaagcgaacatcaaagac
aaagttgtaatggtgacgggggctggtggttctattggttctgagttgtgtcgtcaaatt
gtagagcagtcacctaaatctattattctatttgaattgtctgagtttggtttatatcag
attgatcgtgaactaaatcaacttaagattgaaaaagagctaacctgcgacattattcct
ttgttgggttctgttcagcgtcaacatcgtctagaaacgacaatgtcttcttttaaagtt
caaacggtatatcacgctgcagcatataaacacgttccattagtcgaatttaacgtaatt
gagggggtgcgtaataatatttatggtacctattatactgcgtgcgcggcgattaaagct
ggtgttgaatcatttgtattaatctctacagataaagctgtacgccctactaacgtaatg
ggtacaactaaacgaatggcagagcttggcctacaggctcttgctgatcaagaaaatgca
aaaccaaatggtacgcgattttgcatggtaagatttggtaatgtccttggctcttcaggc
tccgttattcccgtattcaaaaagcaaattgcatcaggcggaccagtaaccgttactcat
ccagagatcactcgtttcttcatgaccattcctgaagctgcacagctagttattcaagct
ggagcaatgggcaagggaggcgatgtatttgttttagatatgggcgagtcagtcaaaatt
acagacttagcaagtaatcttattcagctatctggtctggaagtaaaatctgaggctaat
cctcatggtgatattgagattcaattctcagggcttagacctggtgagaaactgtatgaa
gagttgcttattggcgacaatgtaaaacaaaccgcacatgagagaatcatgacggcgcat
gaggttcatttacccctagaagaatacgagctgttgttgagcgagctcgactttgcctgc
catagtatggatcacgagaatatccgtacattattgttaaatgcccctaccggttttaat
cctacagatggtattggcgatttagtctggagccataatcaattggaattaaatctggtt
catacagagctcgttgtaaacgaatag
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