Vibrio neocaledonicus: D3H41_02125
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Entry
D3H41_02125 CDS
T06228
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00300
Lysine biosynthesis
vnl00550
Peptidoglycan biosynthesis
vnl01100
Metabolic pathways
vnl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D3H41_02125 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3H41_02125 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
D3H41_02125 (murF)
Enzymes [BR:
vnl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
D3H41_02125 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QCO84972
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Position
1:428409..429773
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AA seq
454 aa
AA seq
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MIKVTLSQIADITRGERFGDDLLIDAVSTDTRTIDRGALFVALVGERFDAHNFCQQAVDA
GAGALLVEKRLDVNVPQIVVSDTKLALGEFASWVHQACKTPTVAITGSCGKTTVKEMVAS
ILQLKGKVLFTAGNFNNDIGVPLTLLRSQQDDDYAVIELGANHIGEIAYTTQLVKPDIAL
VNNVAAAHLEGFGSIDGVKQAKGEIYQGLSAGGIAIVNLDSNGEAKWDEVLADKKVITFS
QSNTDADFFASNIVLNAAGEASFDLHIAASSQEIELSLGIIGQHNVANAIAASIIALQMG
ATLEEVRAGLKHLNKVKGRVEVEALSEKIKLIDDSYNASVPAMKAAVDLLAAFPGQRWLI
LGNMAELGEESLALHRQVGEHAAPQKFEHVLTYGADAKVISDLCQGIHFETHQEIIEYIK
QHLDQAVPESHTMLVKGANGARMFEVAAALKEYY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagtaacgttatctcaaattgcagacatcactcgtggtgagcgattcggcgac
gatctacttattgacgcggtttctactgatacacgaacgattgatcgtggtgctctattt
gtggcgttagtaggggagcgctttgatgcgcacaacttttgccaacaagcggtagatgca
ggtgccggtgctttactcgtagaaaaacgcttagatgtgaatgtgccgcaaattgtggtg
tcggataccaaacttgcattgggtgagtttgcttcttgggtgcatcaagcatgcaaaaca
cctaccgttgccatcaccggaagttgcggtaaaacgaccgtaaaagaaatggttgcgagt
atcctgcaattgaaaggcaaagtgttattcacggcgggtaacttcaataatgatattggt
gttccgttgacattattgcgctcacagcaggatgatgattatgccgtgattgagcttggt
gctaaccatataggtgaaattgcttacacgactcagttagtaaaaccagatatcgcgtta
gtgaacaatgtagctgccgctcaccttgaaggctttggttctatcgatggcgtgaaacaa
gccaaaggtgaaatctaccaaggcctttcagctggtggtattgcgattgttaacctagac
agcaatggtgaagccaagtgggatgaagtgttagcagataagaaagtcattactttttca
caaagtaatactgatgcagacttcttcgcttctaacatcgtattgaacgccgcaggtgaa
gcaagctttgacttacatatcgcagcaagctcacaagaaattgaactgtctctgggtatt
ataggtcaacacaacgttgcgaatgcgatcgctgcttctattattgcgttacaaatgggc
gccacattagaagaggttcgtgctggccttaaacatttgaacaaagtgaaaggtcgcgtc
gaggttgaagcgctgagcgaaaagataaaattgattgacgacagctacaacgcgagcgta
ccagccatgaaagcggcagttgatttattggccgctttcccaggtcaacgctggctgatt
ttaggtaatatggcggaattgggcgaggaaagtcttgcacttcatcgtcaagtcggggaa
catgctgccccacaaaaatttgaacatgttctcacatatggtgcagacgccaaggtgatc
agtgatctttgccaaggcattcattttgagacgcaccaagagataattgaatacatcaag
cagcatctagaccaagccgttcctgaaagccatacgatgttggtgaaaggagcgaacggt
gcacgtatgtttgaagtcgctgctgctttgaaggagtattattaa
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