Vibrio neocaledonicus: D3H41_02135
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Entry
D3H41_02135 CDS
T06228
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00470
D-Amino acid metabolism
vnl00550
Peptidoglycan biosynthesis
vnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D3H41_02135
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3H41_02135
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnl01011
]
D3H41_02135
Enzymes [BR:
vnl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
D3H41_02135
Peptidoglycan biosynthesis and degradation proteins [BR:
vnl01011
]
Precursor biosynthesis
Amino acid ligase
D3H41_02135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
Thi4
TrkA_N
NAD_binding_7
DAO
Motif
Other DBs
NCBI-ProteinID:
QCO84974
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All DBs
Position
1:430895..432208
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AA seq
437 aa
AA seq
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MERWQNIHSVVVVGLGITGLSVVKHLRKNQPQLVVKVIDTRVNPPGAERLPESVQLHSGG
WNTDWLSDADLIVTNPGIALATPEIQAVLAKGTAVVGDIELFAWAVQKPVIAITGSNGKS
TVTDLTGVMAKAAGLDVGVGGNIGVPALDLLEQDADLYVLELSSFQLETTSSLKLKAAAF
LNLSEDHMDRYQGMSDYRQAKLRIFNHAALAVVNRDDQETFPDAEMPLVTFGSDNQDFGL
EVDGNRTWLLDHGQRVVASDELKLVGKHNLSNALVALALLKAADVNYHKALNALKNYTGL
THRCQVVADNQGVKWVNDSKATNIASTMAALSGLESTGKLYLLVGGVGKGADFSPLKPIF
ATLNLQLCCFGADGDEFMPLHESAIRFDTMEDVIQQVSSQLKPGDMVMLSPACASFDQFD
NFMARGDAFAALAQKYA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttggcaaaacatacatagtgttgtcgtcgtagggctcggtattaccgggctc
tctgtcgttaaacacctaagaaaaaatcagccacaacttgtggtcaaagtcattgatact
cgtgtaaaccctccaggtgcagagcgcttgccggaaagtgttcaactgcatagtggtggt
tggaatacagactggctttctgacgcggatcttatcgtgaccaaccctggtattgcgcta
gcgacaccagagatccaagccgtattagcaaaaggtacggcagtagtaggtgatatcgag
ttattcgcttgggcggtgcagaaaccggtgattgcgattacgggctcaaacggtaagagc
acagtaaccgacctcacaggtgtgatggctaaggctgcaggtttggatgttggtgttggt
ggtaacatcggtgtgcctgcactggatttgttagaacaagacgcagacctatatgtactc
gaactttcgagcttccagttagaaacgacgtcaagcttaaagctcaaagccgctgcgttt
ctgaatctttctgaagatcatatggatcgttatcaaggcatgtctgactatcgacaagct
aagttgcgtatttttaaccatgctgctcttgcagtcgtgaaccgtgatgatcaagaaacc
ttcccagacgcagagatgccattggtgacatttggcagcgacaatcaggactttggtctc
gaggtggatggcaaccgtacttggctgctcgatcacggtcaacgagttgtcgcaagtgat
gagcttaagttggttggtaagcacaacttatctaacgctctggttgctttagcgctatta
aaagctgcggacgtaaactatcacaaagcattgaatgcacttaaaaattacacgggactg
acacaccgatgccaggtggttgcggataatcaaggcgtcaaatgggtgaatgactctaaa
gcaactaatattgccagcactatggctgcgctatctggtttggaatcgacaggcaagctc
tacttactcgttggtggtgttggcaaaggtgctgacttctcgccattaaaaccgatcttc
gcgacgcttaacttgcaactgtgttgctttggcgctgatggcgatgaatttatgccactg
catgaatctgcaatacgtttcgacactatggaagatgtgattcaacaagtatcttcgcag
ttaaaaccaggtgatatggtgatgctgtctcctgcatgtgctagctttgatcaattcgac
aactttatggcaagaggtgatgctttcgctgctcttgctcagaaatatgcataa
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