Vibrio neocaledonicus: D3H41_02400
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Entry
D3H41_02400 CDS
T06228
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vnl03036
]
D3H41_02400 (xerD)
Chromosome and associated proteins [BR:
vnl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D3H41_02400 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QCO85024
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All DBs
Position
1:496404..497321
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AA seq
305 aa
AA seq
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MTAQQPVNQQDFSLVEQFLDAMWMERGLSENTLASYRNDLMKLLVWMEKHRYRLDFISLS
GLQEYQSHLVDLDYKQTSRARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPQRLPKDI
SEEQVDALLEAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENVSLRQGVVRVTGKG
GKERLVPMGENAVDWIETFIQQGRPALLGDTSSDIVFPSKRARQMTRQTFWHRIKYYALI
AGIDTDQLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQ
HHPRA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacaacagcctgtcaatcaacaagatttttcgcttgttgagcaattcttagat
gcgatgtggatggagcgtggcctatcagagaacacgttggcttcctaccgaaacgattta
atgaagctgctcgtgtggatggaaaaacatcgataccgtcttgattttatcagtttgtct
ggcttgcaagaatatcaaagccaccttgtagatttagattacaaacagacgtctcgtgcg
cgtatgttgtcggcgattcgccgtttatttcaatacctgcatcgtgagaaggtgcgtgct
gatgacccgagtgcgctcttggttagccctaaactgccacaacgtttacccaaagatatt
agtgaagagcaagtggacgcgttgctcgaagcgccagacccgaatgaccctatagaattg
cgcgataaagcgatgctagagctactctacgcgacagggttgcgtgtgacagagctcgtc
agtttgaccatggaaaatgttagcttgcgccaaggggtggtgcgcgtgactggtaaaggt
ggtaaagaacgcctggttcctatgggggaaaacgcggtcgattggatcgagacgttcatt
caacaagggcgccctgcgttacttggtgatacatcatctgatattgtttttcctagtaaa
cgcgcaagacaaatgactcgtcagacgttttggcaccgtattaagtactatgctttgata
gcagggattgatactgatcagctgtcgccgcacgtactgcggcatgcctttgccacgcat
ttattgaactatggcgcagatctcagggtcgtacagatgcttttaggacatagtgactta
tcgaccacgcaaatttatactcacgtggcgactgaacgattgaagcagatccacagtcaa
caccacccaagagcgtaa
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