Vibrio neocaledonicus: D3H41_02420
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Entry
D3H41_02420 CDS
T06228
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D3H41_02420 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vnl01007
]
D3H41_02420 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_02420 (lysS)
Enzymes [BR:
vnl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
D3H41_02420 (lysS)
Amino acid related enzymes [BR:
vnl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D3H41_02420 (lysS)
Transfer RNA biogenesis [BR:
vnl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D3H41_02420 (lysS)
Prokaryotic type
Other AARSs
D3H41_02420 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QCO85028
LinkDB
All DBs
Position
1:501259..502776
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AA seq
505 aa
AA seq
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MTDAVQNETVLEENKLIAERRAKLDAIRKSCKANGHPNDFRRDTLAGDLQKEFGEKTKEE
LEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYADKAVQKVLKEKYQGLDIGDIIGVKG
ALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSRQAFVV
RSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKR
LVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSVAQEVL
GSTSMPYGDETVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDLQNRDLMVSIAKSVHV
EVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFEFFIGG
REVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGID
RLVMLLTNTHTIRDVILFPAMRPQA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgttcaaaacgaaactgtactagaagaaaataagctgattgctgaacgc
cgcgctaaactggatgcaatccgaaagagctgcaaagcgaacggccatccaaacgacttc
cgtcgtgacacactagcgggcgaccttcagaaagagttcggtgaaaagacgaaggaagag
ctagaagagcttaaccacgtagtagcaatcgctggccgtatcatggctaaacgtggtcca
ttcttggtaattcaagaaacttctggccgtatccaagcttacgctgacaaagcggttcaa
aaagtacttaaagaaaaataccaaggtctagatatcggtgacatcatcggtgttaaaggt
gcacttcataagtctggtaaaggtgacctatacgtgaacatggaagagtacgagttgcta
accaaagcactacgtccacttccagagaagttccacggtctaactgaccaagagatgcgt
taccgccaacgttacgttgacctgatcgttaacgaagactctcgtcaagcgtttgtagta
cgttctaaagtcatgtctgcaatccgcaacttcatgatctctaagcagttcatggaagtt
gaaacgccaatgatgcacgttatccctggcggtgcgagtgcgcgtccatttatcacgcac
cacaacgcactagacatgccaatgtacctacgtatcgcgccagagctatacctgaagcgt
ctagttgttggtggttttgatcgcgtattcgaaatcaaccgtaacttccgtaacgaaggc
ctttctccacgccacaacccagaattcacaatgatggaattctacatggcgtacgcagac
tacaaagatctgatggacctaactgaagaactactaagctcagtggcgcaagaagttcta
ggttcaacgtcaatgccttacggtgatgaaacggttgagtttggtggtacttacactcgt
atgagcatgttcgaagcaatcaagcactacaacccagaccacgcgcaaatccaagcgcta
acagaagaagacctacaaaaccgtgatctaatggtttctatcgcgaaatctgttcacgtt
gaagtagaacctttctggacatgtggtcagcttcttgaagagatctttggtgaaacagca
gaacctaagctaatgcagcctacgttcatcactggttacccagcagatatttctccgttg
gctcgtcgtagcgatgataacccgttctttacagaccgctttgagttctttatcggtggc
cgtgaagtagcgaacggtttctcagagcttaacgatgctgaagaccaagatgcacgcttt
aaagcacaggttgaagcgaaagagtctggtgacgacgaagcaatgttctacgatgcagac
tacatcactgctctagagcacggcctaccgccaacagcaggccaaggtatcggtatcgac
cgtttggttatgctactgactaacacgcacactatccgtgacgtgatcctattccctgca
atgcgcccgcaagcgtaa
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