Vibrio neocaledonicus: D3H41_02645
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Entry
D3H41_02645 CDS
T06228
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vnl03110
]
D3H41_02645 (clpB)
Chaperones and folding catalysts [BR:
vnl03110
]
Heat shock proteins
HSP100
D3H41_02645 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
TniB
ATPase_2
AAA_18
AAA_24
bpMoxR
IstB_IS21
NBD_SMAX1
AAA_7
Zeta_toxin
AAA_28
AAA_19
NACHT
DUF815
RHH_3
Motif
Other DBs
NCBI-ProteinID:
QCO85072
LinkDB
All DBs
Position
1:550730..553303
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVDVTHL
RSKLSEMLDRLPKVSGIGGDVQLSSSMGTLFNLCDKVAQKRQDSYISSEVFLLAALEDRG
PLGQLLKDIGLTEQKVSQAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELH
HHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKII
QLKIEQQALSNEHDEASEKRLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSELE
QARMDMEFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVL
SKQTGIPVSKMLEAEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSSRIQENFATLDYQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLE
RLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQNVENPLAKSILSGEIVP
DKTVQLIVTNDQICAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgatcgattcacaagtaagtttcaaatcgctatctctgatgctcaatcacta
gcgttagggcgcgatcatcaatatatcgagccagttcacctcatggtggctttgcttgat
caaaatggcagtccaattcgtccattgcttactatgctggatgtggacgtaacgcattta
cgctctaaattgagtgaaatgttagatcgattaccaaaagtcagtggcatcggtggggat
gttcagctctctagctcgatgggcacattgtttaacctgtgtgacaaagtggcgcaaaag
cgtcaagactcctatatctcgtctgaagtcttcctgcttgccgctttagaagatcgcgga
ccgttggggcaattactcaaagatatcggtttaacagagcaaaaagtcagccaggcaatc
gaaaagatcagaggtggtcaaaaggtcaatgacccgaatgcagaagagcttcgccaagca
ttggaaaagttcaccatagaccttaccgagcgtgcagagcaaggtaaattagatcctgtt
atcggtcgtgatgatgaaatccgtcgtactatccaagtattgcagcgtcgtactaaaaac
aacccagtgattatcggtgaaccaggcgtaggtaagacagcaattgttgaaggcttagcg
cagcgtatagttaacaatgaagtacctgaaggtctgcgtggtcgccgtgtactgtcatta
gacatgggcgcactggttgctggcgcgaaataccgtggtgaatttgaagagcgtttaaaa
tcagtattgaatgaactagccaaagaagaaggcaacgtcatcctcttcattgatgaacta
cacactatggtcggcgctggtaaaggtgaaggctcaatggatgcgggcaacatgctaaaa
ccggcattagctcgtggtgagctccactgtgttggcgcaacaacattggatgaatatcgt
cagtacatcgaaaaagatgcagcattagaacgtcgtttccaaaaagtgctggtggatgag
ccgaccgttgaggataccgtggcgattttacgtggtttgaaggagcgttatgagcttcat
catcacgttgaaattactgacccagcgattgttgcagcggcgagtttgtcacatcgttat
gtttctgaccgtcaactgccagataaagcgatcgacttaatcgacgaagcggcttcaagc
attcgtttacaaattgactctaagccagagtcattagataagcttgaacgtaaaattatc
caacttaagattgagcaacaggcgcttagtaacgagcacgacgaagcgagtgaaaagcgt
ttgaaagcgcttaatgaagaactcaatgaaaaagaacgtgagtatgctgaactagaagag
gtttggaatacagaaaaagcagctctttctggcactcaacatattaagtctgagcttgaa
caagctcgtatggacatggagtttgctcgccgtgctggcgatctaaaccgtatgtcggag
cttcaatatggtcgtattcctgaacttgagaagcagttagatcttgcaacccaagctgaa
atgcaggaaatgacgctattgcgtaataaagtaaccgacaacgagattgcagaagtactt
tctaagcaaactggcatcccagtatccaagatgctagaagcggaaaaagagaaactactt
cgtatggaagacgtactgcataatcgtgtggtaggtcaaagcgaagcggtctctgttgta
tcgaatgccattcgtcgtagtcgagctgggctttctgatccaaaccgaccaattggctcc
ttcttattcttaggtccaactggtgtaggtaaaacagagctttgtaagacacttgcgagc
tttatgttcgacagcgaagatgcgatggtccgtatcgacatgtctgagttcatggagaaa
cactcagtggcaagattggtgggtgcgcctccaggctatgtcggatatgaagagggtggt
tacttaacggaagcggttcgtcgcaagccgtattcggtaattttgttagatgaagtagag
aaagcgcatccggatgtatttaacattctgctgcaagttctcgatgatgggcgtttaacg
gatggtcaaggtcgtactgttgacttccgtaatacggttgtgatcatgacatctaacttg
ggttcatctcgtatccaagagaatttcgcaactttagactatcaaggtatcaagagtgaa
gtgatggatgtggttagcaaacacttccgcccagagttcttgaaccgtgttgacgaaatc
gtggtgttccatccacttggtcaagagcacattaagtccattgcttctattcaattggaa
cgtttggcgaaacgactagaggagaaaggctatcaactagaagtttccgacaaagcactc
gacttgatcgctcaagttggtttcgatcctgtgtatggtgcgcgtcctttaaaacgtgca
attcagcagaatgtcgagaacccgttagccaaatcaattctttctggtgaaatcgttcca
gacaagacagtgcagctaattgttactaatgaccaaatttgtgctcatcaataa
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