Vibrio neocaledonicus: D3H41_02940
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Entry
D3H41_02940 CDS
T06228
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_02940 (bamB)
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_02940 (bamB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_EML_2
DUF7957
WD40_CDC20-Fz
WD40_like
DUF6906
Motif
Other DBs
NCBI-ProteinID:
QCO85121
LinkDB
All DBs
Position
1:610074..611234
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AA seq
386 aa
AA seq
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MKRVFKKALLGALTMGVLAGCAGEKDTIVMAPLPQVDSQFTTSSEWSTSVGDGVGHYFSK
LSPVFANDTLFVASRDGLVKALDPENGKQRWQTDLEEDVIARLSGGITAAYGNLYIGSEN
GEVISLDQETGEIVWRVKVGGEVLAKPVADSGLIIINTSRGMLIALNESTGEQRWALSTE
VPNLTLRGDSTPTAIGGGVFWGTANGRLAAAIVERGQLIWQQPVGTPKGATEIDRLVDVD
SSPIVLGGTLFTIGYNGQLIAIDLRSANPIWKRNYSSATDISTDGSRIFVITEKDHVVAV
DSRSGTELWENSLLEHRQLTAPVIVGNYLVVGDTLGYLHWMDRSTGEFVAQQFVDDSGLA
VGPTLLSDGYVITTRNGDVKKLTINE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagtctttaagaaagccttgctaggggcgttaacaatgggagtacttgccggt
tgtgcaggtgagaaagacaccattgtaatggcgccactacctcaggtagacagtcagttt
acaaccagtagtgagtggagcacgtcggttggcgatggtgttggtcattacttttcaaaa
ctatcccctgtatttgcgaatgatacattgttcgtggcaagtcgtgatggcttagtaaaa
gcgctggatcctgagaatggtaaacaacgttggcaaacggacctagaagaagatgtcatt
gctcgtctctctggtggtatcacagcggcatacggaaacctttacattggctctgagaat
ggtgaagtcatctctcttgaccaagaaacaggtgaaattgtttggcgtgtaaaagttggt
ggtgaggtactggcgaagcctgttgcagattcaggccttattatcatcaatactagccga
ggcatgttgattgcccttaatgagagtacaggtgagcaacgctgggcattgagtacagaa
gtgccgaacttaactttacgtggcgacagtactccgactgcaattggcggcggtgtattt
tggggaacggcaaatggccgactcgcagctgctatcgttgagcgtggtcagttgatttgg
caacagcctgttggtacgccaaaaggcgcgacagaaattgatcgtttggttgacgttgat
tcatcgccaattgtgctaggcggtactcttttcaccattggatacaatggccaacttatc
gctattgacttgcgttcagcgaacccgatttggaagcgtaattactcatctgcgacagac
atttctacagatggtagccgcatctttgtgataacggaaaaagatcatgttgttgccgtt
gattcacgaagcggaactgagttgtgggaaaacagcttgcttgagcaccgacaacttaca
gcgccagttattgttggcaattatctcgttgtcggtgacacgcttggttaccttcactgg
atggatcgttcaacgggcgaatttgttgcgcagcagtttgtcgatgatagtggcttggca
gttggcccgacgttattgtcggatggttatgtgattacaactcgcaacggcgatgtaaag
aaactaaccattaacgaataa
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