Vibrio neocaledonicus: D3H41_03085
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Entry
D3H41_03085 CDS
T06228
Name
(GenBank) TetR family transcriptional regulator
KO
K18476
TetR/AcrR family transcriptional regulator, tetracycline repressor protein
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_03085
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
D3H41_03085
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_1
TetR_N
HTH_20
HTH_Tnp_1_2
HTH_24
HTH_psq
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QCO85147
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Position
1:639540..640142
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AA seq
200 aa
AA seq
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MARLDKETIITVALELLNEVGMEGLTTRKLAQKLGVEQPTLYWHVKNKRTLLDALSVEML
KRNHRHSLPAVGETWQQFLRNNALSFRDALLSYRDGAKVHLGTRPSSDQYDTVEMQLQFM
VDNGFSLKCGLYAISAVGHFTLGSVLEQQEHIAALNDRQQIADDTMPRLLKDALQIMDQD
DGTEAFLFGLEALINGFEKQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgattagataaagaaaccatcatcacagtggcattagagttgctaaatgaagtg
ggaatggaagggctgacaacgcgaaaactagctcaaaaactgggcgtagagcagcctaca
ctatattggcatgtgaagaacaagcgcacattgttggatgcattatctgttgaaatgcta
aagcgtaatcatcgtcattcattacccgcagttggggaaacgtggcaacaatttttacgt
aataatgcattgagctttcgtgatgcattattaagttaccgtgatggcgcaaaagtgcat
ttagggactcgcccgagttcagaccaatatgacaccgtagaaatgcagttgcagtttatg
gtggacaatggtttttcattaaaatgtgggttatatgcaataagcgcggttggtcatttt
acgttaggttctgtgttagagcagcaagaacatatcgcagcacttaatgataggcaacaa
atagcagatgatacgatgcctcgactattaaaagatgctttgcaaattatggatcaagat
gatggcacagaggcttttttatttggtttagaagcattgattaatggtttcgaaaagcag
tga
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