Vibrio neocaledonicus: D3H41_03670
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Entry
D3H41_03670 CDS
T06228
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_03670 (miaB)
Enzymes [BR:
vnl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
D3H41_03670 (miaB)
Transfer RNA biogenesis [BR:
vnl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
D3H41_03670 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QCO85256
LinkDB
All DBs
Position
1:complement(766335..767759)
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AA seq
474 aa
AA seq
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MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSQS
DDAPVMDISFPEIEKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYSCDVSEQVKKE
RLYELQQTINAQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKIVDVFANSLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctacgagctgacggaagagccagaggaa
gcagacgtacttctacttaacacctgttcgatccgtgaaaaagcgcaagagaaagttttc
caccagttaggccgctggaaaacactaaaagataaaaaacctggcgtagttatcggtgta
ggtggttgtgtagcaacgcaagaaggtgaccatattcgtgaacgtgcaccatacgttgac
gttatttttggcccacaaactttgcaccgcctacctgagatgatcaaacaatctcagtcc
gatgatgcaccagttatggacatttcgttcccagagatcgaaaaattcgaccgcctacct
gaacctcgcgctgaaggtgcgacagcattcgtttctattatggaaggctgctctaagtac
tgtacttactgtgtcgtaccgtacactcgtggtgaagaagtaagccgtccaatggatgac
gtactgttcgaaatcgcccaacttgctgaacaaggcgtacgtgaagtaaaccttctgggt
caaaacgtaaacgcgtaccgtggtcctatgcacgatggtgagatctgttcatttgcagaa
ctgcttcgtttggttgcgtctatcgatggtatcgaccgtattcgtttcacgacgagccac
ccgttagaattcacagacgacatcatcgcagtatacgaagatacgccagaacttgtgagc
ttcctgcacttacctgtgcaaagtggtagtgaccgtatcctaacgatgatgaaacgccct
cacaccgctatcgaatacaaatcgatcatccgtaaactgcgtaaagctcgtcctgatatt
caaatcagttcagactttattgttggtttccctggtgagacagacaaagacttccaagac
accatgaagctaatcaaagatgtagactttgacatgagcttcagctttattttctctcca
cgtccaggcacgccagcagcggattactcttgtgatgtgtcagaacaagtgaagaaagag
cgcctttacgaactacagcaaactatcaatgctcaagcgatgcgttactctcgcttaatg
cttggcacagaacaacgtgttctagttgaaggtccttcgaagaaaaacctaatggaacta
cgcgctcgtacagaaaacaaccgtgtagtaaactttgaaggtagtgcagacctaattggt
cagttcgttgatgtgaagatcgtagacgtatttgcaaactcactgcgtggtgagctagta
cgtactgaaaaagacatggatcttcgtagtgtgatttccccaacgcagatgatggcgaaa
acacgtcgcgaagatgagctgggtgtagctacttttacgccgtaa
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