Vibrio neocaledonicus: D3H41_03925
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Entry
D3H41_03925 CDS
T06228
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_03925
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_03925
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Phage_OMP
DUF748
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QCO85283
LinkDB
All DBs
Position
1:800523..801485
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AA seq
320 aa
AA seq
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MKKLAAVISASLLMASAAQAEVYVGGKMGKSWMEDACVAGQACDKDDSTLGAFVGYEMNK
YFAVEAGFDNIGDFNQTSFGGHVEAITLAPKFSLPITEDIALYGKVGGAYVMFDGKDDYS
YLGAAGLEFNLSQNVTARAEYQTLTDISNDVTRATGNTATLGVSFKFGGNDEPVIVEEPV
VVEEVVVEEVVEEPVVVTKTFETQTIGTGSFDLNSTTLKPESAAKLDNLVAFLNEHPQAN
VEVVGYTDTSGPAAYNLKVSEKRAESVANALVEKGIDSSRIQARGEGENNPIASNDTREG
RQQNRRVEVVVPEFEYQVQQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattagcagcggtaatttcagcgtctctacttatggcttcagcagcacaagca
gaagtatacgttggtggtaagatgggtaagtcatggatggaagacgcgtgtgtagcgggc
caggcttgtgacaaagacgattctactcttggcgcttttgttggttacgaaatgaataaa
tacttcgcagtagaagcgggtttcgacaacatcggtgattttaaccaaacttctttcggt
ggccacgtagaagcaatcactcttgctcctaaatttagcctaccaatcactgaagacatc
gcactttacggtaaagtgggtggcgcttacgtaatgtttgatggcaaagatgattactct
tacctaggcgcagctggtcttgaattcaacctaagccaaaacgtaacagctcgtgcggaa
taccaaacactgactgacatcagcaacgatgtaactcgtgcgacaggtaacactgcaaca
ctaggtgtttctttcaaattcggcggcaacgatgagccagtaatcgtagaagagccagtt
gttgttgaagaagtggttgtagaagaagtggtagaagagccagttgtagttacgaaaaca
ttcgaaactcaaacaattggtacaggtagcttcgatctaaacagcacaactctaaaacca
gagagcgctgcaaaacttgataacctagttgctttcctaaacgagcacccacaagcgaac
gttgaagttgtaggttacacagatacgtctggtccagcagcttacaacctaaaagtttct
gaaaaacgtgctgagtctgttgctaacgcactcgttgaaaaaggtattgattcatcacgt
atccaagctcgtggcgaaggtgaaaacaacccaatcgcttcaaacgacactcgtgaaggt
cgtcaacaaaaccgtcgcgtagaagtcgttgttccagaatttgaataccaagttcagcaa
taa
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