Vibrio neocaledonicus: D3H41_04445
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Entry
D3H41_04445 CDS
T06228
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00061
Fatty acid biosynthesis
vnl00071
Fatty acid degradation
vnl01100
Metabolic pathways
vnl01212
Fatty acid metabolism
vnl02024
Quorum sensing
vnl04146
Peroxisome
Module
vnl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D3H41_04445 (fadD)
00071 Fatty acid degradation
D3H41_04445 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
D3H41_04445 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_04445 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vnl01004
]
D3H41_04445 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vnl04147
]
D3H41_04445 (fadD)
Enzymes [BR:
vnl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D3H41_04445 (fadD)
Lipid biosynthesis proteins [BR:
vnl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
D3H41_04445 (fadD)
Exosome [BR:
vnl04147
]
Exosomal proteins
Exosomal proteins of breast milk
D3H41_04445 (fadD)
Exosomal proteins of breast cancer cells
D3H41_04445 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PTS_EIIC_2
Motif
Other DBs
NCBI-ProteinID:
QCO85381
LinkDB
All DBs
Position
1:903023..904714
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AA seq
563 aa
AA seq
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MDKPWLSRYPSDVPETINPEQYESLVEMFEQSVQKYADQPAFMNMGSVMTFRKLEERSRA
FAAYLQNELKLQKGDRVALMMPNLLQYPVALFGILRAGCIAVNVNPLYTPRELEHQLNDS
GATTIVIVSNFANTLEQIVDKTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISMRQALRKGRRLQYVKPFMSGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPVLSPGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFVKELQKHPF
TAITGVNTLFNALVNNEDFHELDFSNLRLAVGGGMAVQRSVAERWQKTTGCYLLEGYGLT
ECSPLVAAYPHDLVEYNGSIGLPVPSTEVRIVDEEGNALANTETGELQVRGPQVMQGYWQ
RPEATKDTINEDGWLSTGDIVKFDDEGFLHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKDEVIAHCREHLTGYKVPKLVEFREDLPKT
NVGKILRRVLREENDAELAKKSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccatggctttcacgttatccaagtgacgtacctgaaaccattaatccagag
caatatgagtctttggtagaaatgtttgaacagtctgtacaaaaatatgcagaccaacca
gcattcatgaacatgggctcggttatgaccttccgtaaattggaagagcgtagtcgcgca
ttcgcagcgtatctgcaaaacgagttaaaactgcaaaagggtgaccgtgttgctctgatg
atgccaaacctactgcaatacccagtggcgttgtttggtattttgcgtgcaggttgtatc
gccgtaaacgttaacccactttacactcctcgtgaacttgaacaccaattgaatgactca
ggtgcgacgacgattgtgattgtgtctaactttgcgaatacgttagaacaaattgtcgat
aaaacaccagtcaaacacgtagtgttaaccagtcttggtcaaatgctgccacgagcgaaa
ggtacgattgtcgattttgtcgtgaagtacgttaagggcatggtgcctaagtacgattta
cctggtgcaatctcaatgcgtcaggctctacgtaaaggtcgtcgtctacaatacgttaaa
ccgtttatgtctggggatgacattgcattcctgcaatatacgggggggacgacaggtgtc
gcgaaaggcgcgattctgactcaccgcaacatgattgcgaacgttctacaggcaaaaggc
gcgtacggaccggttttatctccggggcgtgaattagtcgtaacagcattaccgctgtat
cacgtatttgctcttaccgtaaactgtctgctgtttgtcgaaatgggtggtcgtaactta
cttattaccaaccctagagatattccagggttcgtgaaagagctacaaaagcatccgttt
actgcgattacgggcgtgaataccttatttaatgcattggtcaacaatgaagatttccac
gagttggatttcagtaatctacgtttagccgttggcggcggcatggcagtgcagcgctca
gtggcagaaagatggcaaaagaccacgggttgctatttgctcgaaggttacggtctaaca
gagtgttctccgttggtggcggcatatccgcatgatcttgttgaatacaatggctctatt
ggtctgccggtaccatcaacagaagttcgtatcgtggacgaagaaggcaacgctcttgcg
aatactgaaactggtgaacttcaagttcgtggtcctcaggttatgcaaggttactggcaa
cgacctgaagcaacgaaagatacgattaacgaagacggctggctatcaactggcgacatc
gttaagttcgatgacgaaggcttcctgcatatcgttgaccgtaagaaagacatgatctta
gtatcaggctttaatgtttacccgaacgaaattgaagacgttgtagcactacacggcaaa
gtacttgaagttgctgctattggtcagccgcatgaagtgtctggtgaattagtgaagatt
tatgtcgtgaaacgtgatccgagcttgaccaaagacgaagtgatcgcgcattgtcgagaa
cacttaactggctacaaagttccgaagttggttgagttccgcgaagacttacctaaaacc
aatgtcggtaagatcttgcgtcgtgttttacgcgaagagaatgacgctgaacttgcgaag
aaaagcgcataa
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