Vibrio neocaledonicus: D3H41_04875
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Entry
D3H41_04875 CDS
T06228
Name
(GenBank) GGDEF domain-containing protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
D3H41_04875
Enzymes [BR:
vnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
D3H41_04875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QCO85454
LinkDB
All DBs
Position
1:990881..992884
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AA seq
667 aa
AA seq
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MTTFARTLLLFACCLLSLNVKAEAPLIAHYKVATEADDVVTRVLFNAASKEFGFTVQYVN
YSSFDAILNSVANGEADFAANITYTQERAQRFSYSRPTNIEYTYLFGLKDSTLSDISRVG
VPKDTVYAQLLKQHYPELEQISYQGHEQAVTLLRSGAVDGVVDAINQLKPMLMEGFDAKM
LNDQISIKPVSIISKKDHHLEELDTFATFIHGEAVQKQLREEISQYQFELRRAALRDSIR
LLPLDFNEPIRIKLESIFPYVVYNADGSVEGMTADVVLRSCEILALNCLIISEPGESWGS
MYHEFIQGNFEILAPLTVSRERRAFSYFPKPHYAPASVMVKRLGYKPSTYSHVSQLISER
IGVVKDDFFDQMMTQLLPLKELKRYRTQQELIQGLLNEEVDYIPMDTAMLNHFLRLSELV
PIEQDTAIGEFYESQLSVGLVANEKGAMLAPFFSRAIAMLEVDKIIAQYDVRPDWRTALE
YEIRLATQTQAVFIFVLLFAICVSLYLYRQSNTDNLTGLRNRRALQVKYRKGVNKDLSIL
YLDINHFKRINDTYGHRAGDEVLQLLALKIHYVWSGRCYRIGGDEFILLGYPTQAELTRA
MRELSRIDVKGKLCSDLESISISIGFSAKRERHMSLEQAMHLADEDMYMSKQSSRHDSSY
RDCTVSS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttttgctcgaacactgttgctttttgcatgttgcctcttgagtttgaatgta
aaagccgaagcccctttaattgctcattataaagtcgcgactgaagcggatgatgtcgtc
actcgtgttcttttcaatgctgcttcaaaggagtttggctttaccgttcaatacgtaaac
tactccagctttgatgccattctaaattcagtagcgaatggggaagcggactttgctgcg
aatatcacttacacacaagaacgtgctcaacgttttagttattcccgcccaacaaatatc
gaatatacctacctctttggtttaaaagattcgacgttgagtgacatttcgcgtgttggc
gtccccaaagatacagtttatgcccaattacttaaacaacactaccctgagctagaacag
atctcttatcaaggtcacgaacaagcagtaacactgctacgttcaggtgctgtggatggc
gttgtcgatgccattaaccagctcaagccgatgctgatggaggggtttgacgccaagatg
ctcaatgatcagatttcgataaagcccgtatccatcatcagtaaaaaagatcatcatctt
gaagagttggacacgttcgctacgtttattcacggggaagcggtgcaaaagcagcttcgc
gaagaaatttcccagtatcaatttgaattaaggcgagcagcgttgcgtgattctattcgt
ttattaccccttgattttaatgaaccaatacggattaagctcgaatctatctttccatat
gttgtatacaacgcagatggtagtgtcgaagggatgacggctgatgtagtcctgagaagc
tgtgagatcttggctttaaactgcttgatcattagtgagcctggtgaaagctggggttct
atgtaccatgagtttatccaaggtaatttcgaaattttggcgccgttaacggtcagccgt
gagcggcgcgcatttagctactttccaaagccccattacgcgccagcatcggtgatggtc
aagcgtttaggttacaaaccgagcacatactctcatgtttcacagttgatatctgagcgg
attggcgtagttaaggatgactttttcgatcaaatgatgacgcaactgttaccgctaaaa
gaactcaaacgttatcgtacccaacaagagctcattcaggggctactaaatgaagaagtc
gattacattccgatggatacggcgatgctcaatcattttttacgtctcagtgaattggtt
ccgatagagcaggataccgctattggcgagttttatgagtcacaactctctgttggattg
gtcgcgaatgaaaaaggagccatgcttgcgcctttcttcagtcgagcgatagcgatgtta
gaagttgataagatcattgctcagtacgatgtacgcccagattggcgtaccgcacttgaa
tatgagattcgattagcgacgcaaacacaagctgtgtttatctttgtattattgtttgct
atttgtgtttcgctttatctttaccgtcaatcgaacactgacaacttaacagggttaagg
aatcgtcgtgcgttgcaagtaaagtatcgaaaaggagtaaacaaagatctatccatactt
tacttagacattaatcatttcaaacgaatcaatgacacttatggtcatcgcgctggggac
gaagttttacaactactggcgctaaaaattcattatgtctggtcgggaagatgttatcga
attggaggggatgagttcatattactgggttatcctacgcaagccgagttaactagagca
atgagagagctcagtagaatcgatgtgaaaggcaaattatgtagtgatttggagtctata
agtatctctattggtttctctgcaaaaagggaacggcacatgagcttagagcaagcgatg
catttggctgatgaagacatgtacatgagtaagcagtcctcacggcacgactcctcttat
cgtgactgtacggtttcatcataa
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