Vibrio neocaledonicus: D3H41_05055
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Entry
D3H41_05055 CDS
T06228
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00540
Lipopolysaccharide biosynthesis
vnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D3H41_05055
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
D3H41_05055
Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
Lipid A
D3H41_05055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
QCO85488
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All DBs
Position
1:complement(1033015..1034001)
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AA seq
328 aa
AA seq
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MKSMRFSKLIILTLLSPVAIASTKSTVSFTIDNDGIFGVDQDYTNGVFLSYATDQLTQES
QWKWLSLANSEHANIDKIELVLGHKMWTPSDIEADYPLINDRPYAGYLHTEINYLSLTSD
KAVRYNFTIGATGENSLSEKAQEIVHGITGSTDPQGWDYQIEDKVAFSLGYRVFNKLMRS
EEQKTQWEITNINDINAGNFRSDVSQGVMFRWGTNLANSIGAANISVESPFSASMIAQNT
SSWFLFTGFEGRYRFNDMTIEGDRPGIPEPSAPYDVTLQNWQASAVAGVSWYNQNYGASI
TFTIKTPDYEEAQTDVYGTGSFSVFAFF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ataaagtctatgagatttagtaaattaattattcttacccttctttctccagttgcaata
gcatccactaagtctacggtttcttttaccatcgacaacgatggtatttttggcgtcgat
caagactatacgaatggtgttttcctttcttacgcgacagaccaactgacacaagaaagc
caatggaaatggctgagtctagctaactcagagcacgccaatatcgataaaatagagttg
gttcttggccacaaaatgtggactccaagcgacattgaagccgattatccactaatcaat
gatcgcccatatgccggttacctacacaccgaaatcaactacctttccctaacgagtgac
aaagctgtacggtacaatttcaccataggagctacgggtgaaaattcgctatcagaaaag
gcgcaagaaatcgttcacggcataacaggatcgacggaccctcaaggttgggattaccag
attgaagataaagttgcgttcagccttggttaccgcgtatttaacaaattgatgcgcagc
gaagaacaaaaaacacaatgggagatcaccaacattaacgacatcaatgcgggtaacttc
cgtagtgatgtctctcaaggcgtcatgtttcgttggggtacaaacctagcgaatagcatc
ggagccgccaatatcagtgtcgaaagccctttttcagcaagtatgatcgctcagaatacg
tcgagttggttcttgttcaccgggtttgaaggtcgttaccgctttaatgacatgactatc
gaaggagatcgtcctggcattcctgaaccgtcagcgccatacgacgtcacactgcaaaat
tggcaagcaagtgccgtcgcgggggtatcttggtacaaccaaaattacggtgcaagcatc
acctttacaattaaaacaccggattatgaagaagcccaaaccgatgtttatgggacaggc
tcgttctccgtgttcgcctttttctaa
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