Vibrio neocaledonicus: D3H41_05320
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Entry
D3H41_05320 CDS
T06228
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3H41_05320 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnl03400
]
D3H41_05320 (ruvC)
Enzymes [BR:
vnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
D3H41_05320 (ruvC)
DNA repair and recombination proteins [BR:
vnl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3H41_05320 (ruvC)
RecFOR pathway proteins
D3H41_05320 (ruvC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
PurT_C
Motif
Other DBs
NCBI-ProteinID:
QCO85538
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All DBs
Position
1:1095407..1095928
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AA seq
173 aa
AA seq
DB search
MSIILGIDPGSRITGYGVIRQNGRHLQYLGSGCIRTSEKELPGRLKQIYAGVTEIITQFQ
PDVFAIEQVFMAKNADSALKLGQARGSAIVAAVNAELPVFEYAARLIKQAVVGTGGADKA
QVQHMVQQMLKLPAKPQADAADALGVAICHANTNKTLVALAGKATSARKGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattattttgggcattgacccaggttcgcgcattaccggctatggggtcattcgt
caaaatggacgccacttgcaataccttggtagtggctgcattcgtacttcagaaaaagaa
cttccgggtcggcttaaacagatttatgcaggcgtcacggaaatcattacccagtttcaa
ccggacgttttcgcgatcgagcaagtgtttatggccaaaaacgcggattcagcgctaaaa
cttggccaagctcgtggcagtgcaattgttgctgcggtgaatgcggagttgccggtattt
gaatacgcggctcgtcttattaagcaagctgtcgtcggcactggtggcgcggacaaagcg
caagttcagcatatggttcagcagatgcttaaattgcccgccaagcctcaagcggatgca
gccgatgctttaggtgtggcgatttgtcatgccaatactaacaagactctcgttgcgtta
gcgggcaaagcaaccagtgccagaaaagggcgctaccgttaa
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