Vibrio neocaledonicus: D3H41_05545
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Entry
D3H41_05545 CDS
T06228
Symbol
cysB
Name
(GenBank) HTH-type transcriptional regulator CysB
KO
K13634
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_05545 (cysB)
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D3H41_05545 (cysB)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
MAGUK_N_PEST
Motif
Other DBs
NCBI-ProteinID:
QCO85581
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Position
1:1145107..1146081
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AA seq
324 aa
AA seq
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MKLQQLKYIVEVVNHNLNVSATAESLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT
PAGEEIVRISQEILARVESIKAVAGEHTHPEMGTLNITTTHTQARYALPDVIKGFTSRYP
KVSLHMHQGTPSQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLAK
KDKVTISDLAAYPLVTYVFGFTGRSELDTAFNREGLTPRVVFTATDADVIKTYVRMGIGV
GVIASMAVDEEQDGDLIAIDASHLFGASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV
EQAISLKSNAEIEEMFKDIDLPVR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcagcagctgaagtatattgttgaggttgtaaaccataatctgaatgtatct
gcaacggcggaaagcttatatacctctcagccaggtatcagtaaacaggttcggttgctg
gaagacgagttaggcattcagatttttgaacgtagcggtaagcacttaacgcaagtgacg
ccagctggagaagaaattgtacgtatctctcaagaaattctcgctcgtgtagaaagtatc
aaagcggtggctggagagcacacccatccagaaatggggacgctgaatatcaccacgaca
catacgcaggctcgttatgcactgccagatgtcatcaaaggttttacttctcgttatcca
aaagtgtcgttacacatgcaccaaggtacaccgtcacaaatgtctgaggcgatagctaaa
ggcacagcgaattttgcgattgcgacagaagcgcttcacttatatcaagatgccatcatg
ttgccttgttatcactggaatcgttcaatagttgtgcctaaagaccacccactagcgaag
aaagacaaagtaacgatcagtgatcttgccgcttacccattagtcacttacgtgttcggt
tttactggccgttcagagctggatacagcattcaaccgcgaaggtttaaccccgcgagtg
gtgttcactgcaactgatgcagacgtcattaaaacttacgttcgtatgggtattggtgtg
ggtgtgattgcaagcatggctgtggatgaagagcaggacggtgacttgattgcaatagat
gcgagccatttgtttggcgcgagcaccacgagcatcggcttccgccgtggtacattctta
cgctcttacatgttcgattttatggagcgttttgcaccgcacttgacgcgtccagtggtt
gagcaggcgatttcgttgaagtctaatgcagaaatcgaagagatgtttaaagacatcgat
cttccggtcagataa
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