Vibrio neocaledonicus: D3H41_06590
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Entry
D3H41_06590 CDS
T06228
Name
(GenBank) FAD-binding oxidoreductase
KO
K21060
D-hydroxyproline dehydrogenase [EC:1.5.99.-]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00470
D-Amino acid metabolism
vnl01100
Metabolic pathways
Module
vnl_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D3H41_06590
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Motif
Pfam:
DAO
Pyr_redox_2
NAD_binding_8
ApbA
Pyr_redox
NAD_binding_2
3HCDH_N
Pyr_redox_3
UDPG_MGDP_dh_N
F420_oxidored
2-Hacid_dh_C
FAD_binding_2
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
QCO85781
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Position
1:1373057..1374313
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AA seq
418 aa
AA seq
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MLVKDETKKERIAVIGSGVIGLSIGLKLQQQGYQVTIFDPNGVGNGCSKGNAGHIATEQI
FPLATPALLPQLPKMLLDSKSPVSIRWQDIPNTIGWMIRFLLQTKPSAAEQAKNAIKSLN
ERSVASWRGVLDSIGKAHLIKMNGSLLTFENEKLFKDYQSTLNSLAKNGVAYQVWTQEAI
RERIPDLSHKVRVGVFFPDTGHTLDPYQLCVELSEAFEVLGGKVLQKGVSALAKNGELLV
ESQTYSFDRIIVAAGVHSKPLIRQLTGVKVPIQAERGYHLMVDDKRDVLPFPISSADRKF
IMTPMSGGLRLAGTVEYADVESPPNMKRSEMLFQLGDEMFESGLHPLRQGEKWMGNRPST
VDSLPVIDSIWDGNVLLAFGHQHLGLTQAAITADLLLELIEGKPTSIDLSPFSLQRFA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcaaggatgaaaccaaaaaggaaaggatcgccgtgataggttcgggggttatt
ggcttatcaattggattgaagttgcagcagcaaggttatcaagtcacgatttttgatccc
aatggcgtggggaatggatgctctaagggaaatgcaggtcatatcgcgactgagcaaatc
ttccctcttgcaacgccagcgctgcttccacaattacctaaaatgctgttagattccaaa
agtccggtttcgatccgttggcaagatattccaaacacaatcgggtggatgattcgtttc
ctattacaaacaaagccatcagccgcggagcaggcaaaaaacgcgattaagagtcttaac
gagcggtcagtggcaagttggcgtggcgtgcttgattcaatcggaaaagcgcatctaata
aaaatgaatggttcattgctcacttttgaaaacgagaaactgtttaaagactaccaaagt
acgcttaactcactggctaaaaacggtgtggcgtatcaagtttggacacaagaggcgatt
cgagagaggatacctgatctcagccataaggttcgtgtcggcgtcttttttcccgataca
ggtcatacgctagacccttatcagctctgtgttgagctaagtgaagcttttgaagttctt
ggcggtaaggttttacaaaaaggtgtatctgcgttggcgaaaaatggcgagctgttggtt
gagtctcaaacgtattcatttgaccgaatcattgttgccgctggtgtacattctaagcct
ttgatacggcaactaaccggagtcaaagtgcctattcaagccgagcgtggttatcaccta
atggtggatgacaagcgtgatgtattgccatttcctattagctctgccgatagaaaattc
atcatgactccgatgtctggtgggctacgcttggcaggcactgttgagtatgccgatgta
gaatcaccacccaatatgaaacgttcagaaatgctttttcagttaggtgatgagatgttt
gaatcggggttacatccactcaggcaaggagaaaagtggatgggtaatcggccttcaaca
gtcgactcgttaccggttattgatagcatttgggatggaaatgtattactggcatttggc
caccaacaccttggattaactcaagcggcgattacggcagatctccttttagagcttatc
gaaggaaagccgacatcgattgatctttcacctttttcactacaacgatttgcctga
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