Vibrio neocaledonicus: D3H41_06655
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Entry
D3H41_06655 CDS
T06228
Symbol
oppB
Name
(GenBank) oligopeptide ABC transporter permease OppB
KO
K15581
oligopeptide transport system permease protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01501
beta-Lactam resistance
vnl02010
ABC transporters
vnl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D3H41_06655 (oppB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_06655 (oppB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3H41_06655 (oppB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_06655 (oppB)
Transporters [BR:
vnl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
D3H41_06655 (oppB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
QCO85794
LinkDB
All DBs
Position
1:complement(1389068..1389988)
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AA seq
306 aa
AA seq
DB search
MIWYIVKRLAIAIPTLLFIALVSFWLMHIAPGGPFDMERPMPEVVRANIEAKFHLDQPFL
TQFWIYIGNFIQGDLGPSFVYQDFSVTQLVAQSWPVSAVLGVLSFCISVPLGMLLGTIAA
LNRNSRLDYGLMTLSMTGVVVPAFVLAPVLVMIFAIQLGWFPAGGWEGGKLAFLVLPVLS
LAIGSIASIARVMRGAMIETLNQPYIRTAKAKGLSTSYILFHHALRPSLIPVVAMLGPAF
VSVVTGSVIIDIFFGTGGMGQHFVSGALNRDYGLVMGITLIVASLTIFFNLVVDLLYTII
DPRIRV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatttggtacattgttaagcgattagctatcgctatccccacgcttctattcatcgca
ctcgtatcattttggctgatgcacattgcaccaggggggccatttgatatggaacggcct
atgccagaggtggtacgtgcgaatatcgaagcaaaattccatttggaccagcccttcctt
actcagttttggatttacattggtaatttcatacaaggagatctcggtcctagcttcgtt
tatcaagacttcagtgttacacagctcgtcgcacaatcatggccagtttcagcagtatta
ggcgtactctccttttgtatttccgttccacttggcatgttgcttggcaccattgcggca
ttgaaccgaaatagccgcctagattacggcctgatgacactttcgatgactggagttgtg
gttccggctttcgtgcttgctccagttttagtcatgatcttcgctattcagctcggctgg
ttccctgctggtggttgggaaggaggaaagctggcttttcttgttcttcccgtgctcagc
ctggcgattggctccattgcgagtattgcacgcgtcatgcgtggcgcaatgattgaaacg
ctcaaccaaccatacattcgaacggcaaaagccaaaggtttgtccacatcctacatttta
ttccatcacgctttgcgaccatccctgattcccgtcgttgcgatgctcggccctgcgttt
gtttctgtcgtgacaggctcggtgattatcgacattttctttggtacaggtggcatggga
caacactttgtgtctggggctctcaaccgcgactacggcctagtaatgggcattactctg
attgtcgcttcactcactatcttctttaaccttgtggtcgacttgctatatacgattatc
gaccctcgtatacgcgtttag
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