KEGG   Vibrio neocaledonicus: D3H41_06975
Entry
D3H41_06975       CDS       T06228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl03030  DNA replication
vnl03430  Mismatch repair
vnl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D3H41_06975
   03430 Mismatch repair
    D3H41_06975
   03440 Homologous recombination
    D3H41_06975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vnl03032]
    D3H41_06975
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_06975
Enzymes [BR:vnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D3H41_06975
DNA replication proteins [BR:vnl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D3H41_06975
DNA repair and recombination proteins [BR:vnl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D3H41_06975
SSDB
Motif
Pfam: RNase_T RNase_H_2 DUF3487
Other DBs
NCBI-ProteinID: QCO85853
LinkDB
Position
1:1452482..1453231
AA seq 249 aa
MMWFSKKAEKEHPLLDTSQTPEWSMLFKQLAKEAKDQRLKRYYSTPMVNGETPIEQVPFV
SVDFETTGLNSEEDVILTIGLVPFTIDRVQCNGSAHWVVNPNRELNHESVIIHGITDSEV
KNAPQLSQILGEILDALSGKVVLVHYKNIERQFFNNALLNSIGEGIQFPVVDTLDIEYAI
QRRECRGFINKLKGKKPGSVRLGHARERYGLPAYQPHHALTDALATAELFQAQLQYHFNR
NMPISSVWQ
NT seq 750 nt   +upstreamnt  +downstreamnt
atgatgtggttctcaaaaaaggcagaaaaagaacatccgttgttggatacatcccagacg
ccagagtggtcaatgttgttcaaacaactcgctaaagaagcgaaagaccagaggctcaaa
cgctattattcgacaccgatggttaatggggaaacaccaattgaacaagtgccatttgtc
tcggtagactttgagacaacaggattgaactcggaagaggatgtcattctcacgatcgga
cttgtgccgttcactattgatcgtgttcaatgtaatggttctgctcattgggtcgttaac
ccaaacagagagttaaaccacgagtctgtcattattcacggtatcactgactctgaggtt
aaaaacgcgccgcagctgtctcagatcttgggtgaaatattggatgcgttgtcaggcaaa
gtggtactcgttcactataagaacattgaaaggcagttctttaataacgccttgctaaat
agcatcggagaggggatacagtttcctgttgttgatacgttagatattgagtatgcgata
caacgccgtgaatgcagaggttttatcaataagttgaaaggcaagaaacccggttctgta
cgattagggcacgctcgtgaaagatatggcctccctgcttatcaacctcaccatgccctg
acggatgcgttagcaactgcggagctgtttcaagcacaactgcagtatcactttaatcga
aacatgccaatatcttcggtttggcaatag

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