Vibrio neocaledonicus: D3H41_07055
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Entry
D3H41_07055 CDS
T06228
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D3H41_07055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_07055
02044 Secretion system [BR:
vnl02044
]
D3H41_07055
Transporters [BR:
vnl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
D3H41_07055
Secretion system [BR:
vnl02044
]
Type I secretion system
Adhesin protein transporter
D3H41_07055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
ATP-synt_ab
ABC_ATPase
MeaB
MMR_HSR1
AAA_29
DUF87
AAA_16
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCO85868
LinkDB
All DBs
Position
1:1485144..1487315
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AA seq
723 aa
AA seq
DB search
MKHHSSSSSELTNDPWGQSLAWLMRYFEVRHHTKKVLSGLPLVEGRLDSDLFIRATERAD
LELTLIDLKSTAMLSFPLVVINRKTLQPAIISERHNSDYQVTLFSEDQGEAQYVTSEELH
NQFQPQAWQVSMRPELDKRISSIQADYNEHWLFAVVKEMSPWYRDLLIASFLINTLALVI
PLFTMNVYDRVVPNQAFSTLWVLVAGVSVIIIFDWLLRKARGVVTDTAGKYIDNKLSSIL
FSKVMGMKLEHRPASVGAFARQLQDFDSVRDFFTSASLVTLVDLPFTLLFLVLIGWLGGA
MMFIPIAVMFTLLILGFAVKAKIEQSHTESAALSMKRQAHLFDSLSSLKEIKQNNATGEA
QKRWEQTVSMLSDWQNQSRNYSNIVAYSIQSSQQIITVMLLVTGVYRISEGLLSMGGLIA
IVMLSGRAAGAINQLAMLLLRYQQTKTAVEGLNSIMSLPQEAQRSQVITSAEFTGNIRLE
NVSFQYPDVDMPCLRDINLTIKQGERVGVIGSAGAGKSTLLSIMTNQLSASQGSVYFDDI
DSQLWPAELIREKTGWVGQDSHLIYGSIMENIVLGHHVIDQERLRRAIELSGLNQYMSRL
PHGLETQVGEGGRYLSGGQRQAVAISRAFYRNPAALILDEPTSSLDQPAENALFNALKSL
PHSTTMIISSHKHSLLSLCDRIVVLDKGTILREGAPQEIFAKQQSNAKTNRVRAVSIVRE
GGQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcactcatcctcatcaagtgagctgactaacgatccttgggggcaatcgtta
gcttggttgatgcgttattttgaggttagacaccatacaaaaaaggtgctttctggatta
cctcttgttgagggtagattggatagtgacttattcatcagagccactgagcgagccgat
cttgaactcacattaatcgatttaaaatccaccgcaatgttgagctttccattggtggta
atcaataggaagacgttacaacccgctattatatctgagcgacataacagcgattatcaa
gtcacgttatttagtgaagatcaaggtgaagcgcaatatgtcacgagcgaggagctgcat
aatcaattccagcctcaagcatggcaagtttctatgcgtccagagctggacaaacggata
agttctattcaagcggattataatgaacattggcttttcgccgtagtgaaagaaatgtct
ccgtggtatcgagatcttttgattgcctctttccttatcaatacgctagcgctagttatt
ccgcttttcactatgaacgtttacgatcgtgtagtgcctaatcaagctttcagtacatta
tgggttttggtcgctggtgtctccgtcatcattatttttgattggctattgcgtaaagca
aggggagttgtcactgataccgcgggtaagtacatcgataacaagctttcttcgatactt
ttttctaaagttatggggatgaaacttgaacaccgtcctgcatcagtcggtgcattcgct
cgacaactacaagattttgatagtgttcgcgatttttttacttctgcatctcttgtgacc
ttagttgatctcccatttacgttgttatttttagtcttaataggttggctaggtggggca
atgatgttcatacctattgccgtcatgtttaccctgctgatccttggctttgcggtaaaa
gcaaaaatagaacaatcacatacggaaagtgctgcactatccatgaagcgacaagctcac
ttgtttgattcattgtcctctttaaaagagattaagcaaaataacgctacgggagaagca
caaaagcgttgggagcaaacggtatccatgctttctgattggcaaaatcaatcgcgaaac
tattcgaatatcgttgcttactccattcaatctagccagcagataattaccgtaatgtta
cttgtaacaggcgtgtacagaatttctgagggattgctaagcatgggggggctcattgct
attgtcatgcttagcggtcgtgctgcaggggcgattaaccagttagctatgctgttactt
cgctatcaacagacaaaaacagcggttgaaggcttaaattctatcatgtctttacctcag
gaggcgcaacgcagtcaggtcattacgtctgccgaatttacagggaatatacgtttagaa
aacgtgagcttccaatacccagatgttgatatgccatgtttgagagatattaatcttact
atcaagcaaggcgaacgcgttggcgttattggtagtgcaggagcaggaaagtctacactc
ctttccattatgaccaatcaactcagtgcctcacagggcagcgtttatttcgatgacatt
gacagtcagctttggcctgccgaattgataagagagaaaacgggttgggttggccaagat
tcgcatcttatatacggcagtattatggaaaacatagtattaggacatcatgttattgat
caagaacgattacgccgtgcgatagaattatcgggtttgaaccagtacatgagtcgcctt
cctcatggtctagaaacgcaagtcggagaaggagggcgttatttgtcggggggacaaagg
caagctgtagcgatttcaagagctttttatcgaaacccagcagcattaattttagacgag
ccaaccagttccttagaccagcctgctgagaatgcgttgtttaatgctctcaaatcgttg
ccgcactcgacgacgatgattattagctctcataaacattccttattatcgctttgtgat
cgaattgttgtgcttgataaaggcacaattttgagggaaggagcgccccaagaaattttt
gctaaacaacagtctaacgcgaagacgaacagagtacgcgcagtatcaattgtacgcgaa
ggaggtcaatga
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