Vibrio neocaledonicus: D3H41_07070
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Entry
D3H41_07070 CDS
T06228
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_07070
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_07070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
APP1_cat
TSP_3
FlpD
Motif
Other DBs
NCBI-ProteinID:
QCO85871
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All DBs
Position
1:1489947..1490567
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AA seq
206 aa
AA seq
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MDKFAVTSLLVFMLAGCAESPNTTLTTYQYYDLKDNDSDGVINQRDNCADTPKGVVVDSE
GCANWVNDSQTHLISFFFAMDEHQVTPSHDMPLSELKALLQSNPNAQVILIGDTSPEASL
EYNKALAKKRTAAIRELLVRNGIQDNRIEEQEFYQNTALTVQLKKRERRTIAVVNTKAES
TEQAWTIFSSDSELTPNSKLELNYEN
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggataaattcgcagttacgagtcttctagttttcatgttagcaggctgtgctgaatca
ccgaatacgacgttgaccacttaccagtactacgaccttaaagacaatgatagtgatggt
gtgataaaccaacgagataactgcgcagatacgccaaaaggtgtcgttgttgacagtgaa
ggctgtgcgaattgggtcaacgactcgcagacacacctgatcagctttttctttgcgatg
gatgagcatcaggtaacgccatctcatgatatgccgctaagcgagttgaaagcattgctt
cagagtaaccccaatgcgcaagtcatactgataggagatacaagccctgaagcgtcactc
gaatacaacaaagcgttggcaaagaaaaggacggcagctatacgagaattgctagtgaga
aacggcattcaagataatcgaattgaagagcaagagttttatcagaatacggcattgacg
gtacaactaaaaaaacgggaaaggcgcacaattgctgttgtaaacacgaaagctgaaagt
actgaacaagcgtggactatatttagttcggacagcgagttgacacctaattcgaagttg
gagttgaattatgaaaattaa
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