Vibrio neocaledonicus: D3H41_07225
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Entry
D3H41_07225 CDS
T06228
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D3H41_07225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_07225
Transporters [BR:
vnl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D3H41_07225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
cobW
UPF0182
AAA_29
RsgA_GTPase
KAP_NTPase
AAA_18
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QCO85902
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All DBs
Position
1:complement(1526160..1527899)
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AA seq
579 aa
AA seq
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MRIFWQLRWYFQQKWRHYVGSILLFAVISALQLVPPKAVGIIVDGVVDNTLDTNTLILWL
SGLTVLIFTIYGCRILWRIWLFGASWELGTILRNRLYRHLSTQPPRFFERYKTGDLMARG
TNDVRNIVMTAGEGVLTAADSLITGIAVLIIMVTQVSWKLTVMALLPMPFLAIIIFFIVR
ILHQRFRVAQEAFSTMSDMTQESLNGVRMLRAFGLENQEQQRFEEVVDDTGEKNIAVARV
DARFDPAIQLTIGLSFLLSVAAGAYLVDKGEITLGDLTAFTMYLGLMIWPMLAFAFLFNI
LERGSAAWNRLQEIFDEKPAIISGNKPIENKPLPLKIDIDDFHWSSDLPPALTEVNIELE
PGKMLGVAGPVGSGKSTLLTLLLRQHDLENGSIKFGDVEIKDALLPQWRNRFAVVNQSPF
LFSKSIFDNIALGNPNAEKEEVYRAAKLACIHDDIEKFPEGYQTEVGEKGITLSGGQKQR
IAIARAMLLNAQVLVLDDALSAVDGRTEHQILKNLETYYRNQALIVIAHRLTALEAADEI
IVLNHGHITERGQHSALLAHKGWYAEMFEYQKLEQAMEE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattctggcagctacgttggtatttccaacaaaagtggaggcactatgtcgga
tccattctgcttttcgctgtgatatcagcactacagcttgttccgcccaaagcagttggc
atcatagttgacggcgtcgtagacaacactttagatacaaatacgctgattctatggctc
tcagggttaactgtactgatctttactatttatgggtgtcgcatcttatggcgaatttgg
cttttcggcgcaagctgggagctcgggaccattctacgtaaccgtctatataggcattta
tcgacacagccacctcgtttttttgaacgttacaagacgggggatctgatggctcgtggc
actaatgatgtgcgtaatatcgttatgacagccggcgaaggggttttaaccgccgcagac
tctttgatcactggtattgcggttttaatcattatggtaacgcaagtaagctggaagctc
accgtaatggcgcttcttccaatgccatttcttgccatcatcatcttctttattgtgcgt
atcctacatcaacgctttcgtgtcgctcaggaagccttttctaccatgtcagacatgaca
caagagtcacttaatggcgtgcgaatgctgcgtgctttcggattagaaaaccaagagcag
caacgttttgaagaggttgtggatgatactggcgaaaagaacatcgctgtcgcaagagtc
gatgctagatttgacccggcaattcagttaaccatcggtctttctttccttcttagtgtc
gctgctggtgcttaccttgttgataaaggtgagatcacgcttggtgatctgaccgcattt
acgatgtatttagggttgatgatatggccgatgctggcattcgcattcctatttaacatt
ttagaaagaggctctgctgcatggaaccgattacaagagatctttgatgaaaagccagca
attatcagtggcaataagccaatagaaaataaaccacttccgttgaaaattgatatcgac
gatttccattggtctagtgatttaccgcccgctttgacggaagtaaacatcgaactggaa
cccggaaaaatgttgggagttgcagggccggtaggaagcggaaaatcgaccctgttaaca
ctacttttgcgtcaacatgatttagaaaacggctcaattaaattcggtgatgtcgagatc
aaggatgccctacttccacagtggcgcaaccgttttgctgtcgttaaccaaagtccgttt
ctattctccaaatctatcttcgacaatattgccttaggcaaccctaatgcagagaaagaa
gaagtctatagagcagcaaagttagcctgtatacatgacgatattgagaagtttcctgaa
ggctaccaaacagaagttggtgaaaaaggcattacactctccggcgggcaaaaacaacgt
attgcgatagcacgcgctatgctgctgaatgctcaagtgttggttttggacgatgcactt
tccgctgttgatggacggaccgaacatcaaatccttaagaatttggaaacatactaccgt
aatcaagccctaatcgttattgcgcaccgcctcaccgcattggaagcagcagacgagatc
attgtattgaatcacggacacattactgaacgtgggcaacatagcgcgttattagcgcat
aaaggctggtacgccgagatgttcgagtatcagaaactagagcaggcgatggaggaataa
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