Vibrio neocaledonicus: D3H41_07890
Help
Entry
D3H41_07890 CDS
T06228
Name
(GenBank) ATP-dependent endonuclease
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
D3H41_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_21
OLD-like_TOPRIM
AAA_23
DUF2813
SMC_N
AAA_29
AAA_27
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QCO86016
LinkDB
All DBs
Position
1:1661375..1663189
Genome browser
AA seq
604 aa
AA seq
DB search
MKLRSVRIENFRGISLAEIDFADFTTLVGPNNIGKSTILAALNMVLDNRKPKIEDWPGQA
QSNDIMKITCILEELEPWEKAKPAISKLLHDDTLQIRMIAKWPENTDAPSCKYYVRHSLI
ETPFDGKGISEAKKDPLLKQILSEMDITKADEYKKRADDIRDYTIKNYEDRTSEVVDWHE
KSFANSLQQAVPHVMYVPASFKIEDELKTTGNSPFAYLFTNKLFPKVEGDDSYLEYINKA
QDLQQKLKGKADDGQEIDGLSDVLDSVSSTLNDILDFDSKVKLAVGELDIKSLFTKAATF
LIDDELETSLQYQGSGVQRALAFAMLESNAEIEAQVDGAQRTTIVLYEEPELYIHPHLMR
RLRSTLQKRSGEPLWQVICSTHSPFLIDLANQPESIKLIKRADENRRVVSQLPTEIFEKS
PDYDEKVMLRAVLDFHPTVCESLFAKRVVIVEGDTEVAVFSMIEELVEKLEIENSKHKDT
TVVSAGGKWTIPAIVKVLKGLGIEYKVIHDTDRKDNTDEQLEEVGNLHPYRANAKIAAIA
GDENVFRVDDTFEHVLWGKEQAYKSSSKPYHSWRCVRAFLDGKEELSDESKATLKEIIEF
AFCD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagatctgttagaattgaaaactttcgcggaatctctttggcagagatcgat
ttcgctgacttcactactttagtcggtccaaataacatcggtaaatctaccatccttgct
gctctaaatatggtattagataaccgtaaacccaagattgaagattggccagggcaagct
caatcgaatgacatcatgaagattacttgtattcttgaagaattagagccttgggaaaaa
gctaaacctgctatttctaaacttttacatgatgatacgcttcaaattcgtatgattgca
aaatggccagagaatacagatgcgccttcatgtaaatactatgttcgtcactcactaatc
gaaactccgtttgatggcaagggcatttcagaagctaaaaaagacccacttttaaagcaa
attctgtctgaaatggatattacaaaggctgacgagtataaaaaacgcgcagacgacatt
agggactacacgattaaaaattatgaggatcgaactagtgaagttgttgattggcatgag
aagagctttgctaactcactgcaacaagcagtacctcacgtaatgtacgtacctgcaagt
tttaaaattgaagatgagttaaaaacaaccggtaactctccttttgcctacttgtttaca
aacaagttgtttccaaaagttgagggtgacgacagctaccttgaatacataaataaggct
caagacttacagcagaaactaaaaggcaaagctgatgatggccaagaaatagatgggtta
tctgacgtgttagattccgtatcttcgactctaaacgacatacttgattttgattcaaaa
gtaaaacttgcagttggtgagcttgacattaagagtttgttcacaaaagctgctactttt
ctaatagatgatgagttagaaacgagtcttcaatatcaaggcagcggagtccaacgagct
ctagctttcgcaatgctagaaagcaacgctgaaatcgaagctcaagttgatggagcgcaa
cgcactacaatagtgctatatgaagagccggaattatacattcaccctcacttaatgcgt
cgattacgaagcacgctgcaaaagagatctggtgagcctttgtggcaagtaatttgctct
acacattctcctttcttgattgatttagctaaccagcctgagtcaatcaagttaatcaag
agagctgatgagaatcgacgggtcgtaagccagctaccaactgaaatatttgaaaagagt
ccagactatgacgaaaaagtgatgcttcgcgccgttcttgacttccatcctaccgtatgt
gaaagccttttcgctaagagagtagtgattgttgaaggcgacaccgaagtagcagttttt
tcaatgatagaagagttagttgagaaacttgagatagagaactctaaacacaaagacact
acagttgtttccgcaggggggaaatggacaatccctgcaattgtgaaggtgcttaaaggt
ctaggaatagaatataaagttattcacgataccgacagaaaagacaatacggatgaacaa
cttgaagaagttggtaacctccatccttatcgggcgaatgctaaaattgctgcaattgct
ggtgatgagaatgtattccgtgtagatgacactttcgagcatgttctttggggtaaagag
caagcgtataaatctagcagtaagccttatcattcatggagatgcgtacgtgcgttttta
gacggtaaagaagagctatcagacgaaagcaaagcaacattaaaagaaatcatagaattt
gcattctgcgattag
DBGET
integrated database retrieval system
