Vibrio neocaledonicus: D3H41_08465
Help
Entry
D3H41_08465 CDS
T06228
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_08465
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
D3H41_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_11
DUF4423
Dimerisation
MarR_2
DUF4777
HTH_5
HTH_36
Rrf2
HTH_27
TrmB
MarR
Motif
Other DBs
NCBI-ProteinID:
QCO86127
LinkDB
All DBs
Position
1:1789216..1789914
Genome browser
AA seq
232 aa
AA seq
DB search
MPKARKNIQSLERGFLILELLSMSESPLSLQTISNAIQLNKTTVHGLLATLHSLGYVSKH
NHSYSLGFRCYELSKPIEQKNEAIRQHFVPLLKKMAQMTNNTAYLAVQSGAKEYLYIDAI
EQDNPLTIRSPRGKREGLTTSAIGKVFLSFDDELRRTLRLENQISPTLETELNQVVLSGY
ALDLEEAEPNLNCLAIPLYLDGKVVAVAGVSGAASELTVTRLKHFARIFLKF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaaggcaagaaaaaacattcagtctctagagcgaggttttctaatcctcgagttg
ctctcgatgagtgagtctcccctatcattacagacgatcagtaatgcgatccagttaaat
aagacgactgttcacgggttacttgcgactctacactctcttggatatgtatccaaacac
aaccatagctacagcctagggtttagatgctatgaactgtctaagccgattgaacaaaaa
aacgaagctatccgacaacattttgttccattgctgaaaaaaatggcccaaatgactaac
aacacagcttacctcgctgtacaaagtggcgctaaagagtacttgtatatcgatgctata
gagcaggataaccctcttactatccgtagcccgagagggaaacgagaaggactcacaaca
tctgcgatcggcaaagtttttcttagttttgatgatgagcttcgtcgaacattacgcctt
gaaaaccaaatatcccccacgttagaaactgaacttaatcaggttgtattatcaggttac
gcactcgatttagaagaggcagagccaaacctcaattgcttagcgatccccctttacttg
gatggtaaagtcgttgctgttgcaggtgttagcggtgctgcctccgaactgacggtcact
aggctaaaacactttgcaagaatctttctcaaattttaa
DBGET
integrated database retrieval system
