Vibrio neocaledonicus: D3H41_08560
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Entry
D3H41_08560 CDS
T06228
Name
(GenBank) porin
KO
K16076
outer membrane porin protein LC
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_08560
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_08560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QCO86144
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All DBs
Position
1:complement(1808316..1809290)
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AA seq
324 aa
AA seq
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MKMTRTSIAIAALFSASAANSAVVYEDQESVLNIHGRAQGMYYFSDDKNADGDNSYIRVG
LAGESKINEDLYAFGLYELEFKSNRRDADGIEDDEFDIRKGYVGVGADYGTVSYGRQYGA
VTLVSDYTDIFPEFGNEAAGVSADLYGTGRSDSVFKLTTSYEGLNIHVSYQAENDEVSTD
AASYGAAADYKLPYGFKVALGYNEGEGQSGAEDAELLTGAIAFEYDKFYASVLYSDGENW
AKDGSESNIDYTGIEAVATYEVTDKLWALVGYNNLERDDEDVVDYYSLGAEYDLTSNFKA
LAEYRITDVDNEDDILAIAARYSF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacaagaacgtcgatcgcaatcgctgcacttttttctgcaagtgctgcaaat
tcagccgtagtttatgaagatcaagaatcagtattaaatattcatggccgagcgcaaggg
atgtattatttctctgatgataaaaatgcagacggagataatagctacattcgtgtagga
cttgcaggtgagtctaaaataaatgaagatctttatgccttcggcttatatgagttggaa
tttaagtctaatcgcagagatgctgatgggattgaagatgatgaatttgatatccgaaaa
ggctatgtaggagttggtgcagattacggaacagtaagttatggacgtcaatacggtgcg
gtcactttagtatctgactacacggatattttcccggagtttggtaatgaagctgctggc
gtaagtgcggatctatatggtaccggtcgctccgattcagtatttaagctaacgacaagc
tatgaaggtttgaatattcatgttagctatcaggctgaaaacgatgaagtgtcaacagat
gcagcctcttatggtgcggcggcggactacaagttgccatatggcttcaaagttgcgctt
ggttacaacgaaggtgaagggcaatcgggtgcagaagatgcagagctgctaacgggtgct
attgcatttgaatacgacaagttttatgcctctgttttatacagtgatggtgaaaactgg
gctaaagatggttctgaaagtaatattgattacaccggtattgaagcagttgccacttat
gaagtaacagataagctttgggcactagttggctataacaatctagagcgtgatgatgaa
gatgtcgtcgattactactcactaggtgcagagtacgatttgacttctaattttaaagca
ctagcagaatacagaattacagatgtagacaatgaagacgatattcttgcaatagctgcg
agatattcattctaa
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