Vibrio neocaledonicus: D3H41_08960
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Entry
D3H41_08960 CDS
T06228
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_08960
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_08960
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
QCO86223
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All DBs
Position
1:1888345..1890480
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AA seq
711 aa
AA seq
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MESPIRFHRSAVAIVVSALLAGHANATESVSQHETITVLGETYRNTATKTVLEPEETPQA
ITVITKDDMDLRGVNSVSEALRYAPGVNTELRGGAVSRLDLFNIRGFINYTNFYDGLPLL
YNGWNLQPQVDSVALEQIEVFKGPTSVLYGNIPPGGMVNIIAKAPQSTPSHSVSISTGTN
SLKELTFDTTGQIGDSNVDYRIVGLAKQRDGQADTSEDERYVLAPSFNWQATESTLVNVN
VYYQNDPSAGIYTTVPASGSVIKNPLGSMSPSTYLGDEDWNTYEREVLMMGYKVQHDFNN
NWQFLQNARYMTADAYQENTYNGALQADNRTVGRNAYLTDEKSKSFVIDNQLSGYVKTGN
FEHNLLFGLDYQYLDSDVKYKDTLGYSLTQDIFNPDHNSIDRNALNFQYKQNLDIKTKQI
GVYFQDQVRYDQLVMIAGLRWDKYDSNTDAVSDYLGAVSNSKEELDDTNVSFRVGGLYEL
DFGLSPYLTYSESFEPIAGADSSGKAFEPSTGHQWELGFKYAPLSGDISGNLALFHITKK
NAILTDPNNPYAPNYQAGEVVSQGIELEAKWQATAQADFTLGYTYTDMEITEDSYYNQEG
KTPVWVPEQTASLWANYFFEGNLSGLRTSAGVRYIGEAQIDAQNSQKVPDYTLFDLAASY
DFSTVSESMKGASVTLSASNLFDKEYYSCYDKNNCWFGAERSIEAKLEYNF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtccgattcgatttcatcgttcagcggttgctatcgtcgtatccgcattgctc
gctggccacgccaatgcgactgagagcgtatcccaacacgaaacgattacggtgctagga
gaaacataccgaaacaccgcaactaaaaccgttttagaaccggaagaaacaccgcaagcg
atcacggtaatcactaaagatgacatggacctgcgcggcgtaaactcggtgagcgaagca
ttgcgttatgcgcctggcgtaaatacagaattgcgtggtggtgccgtttcccgacttgac
ctattcaatattcgtggttttattaactacaccaacttttatgatggtcttcctttgctg
tacaacggttggaaccttcaaccgcaggtcgattccgttgctcttgagcaaatcgaggtt
tttaaagggccaacgtctgttctttacggcaatattccaccaggaggtatggtcaatatt
atcgccaaggcgcctcagtcaacaccctcacactctgtctcgattagtacagggactaac
agcctaaaggaactgacgttcgacaccacaggacaaattggtgattctaatgttgattac
cgtatcgtcggcctggcaaaacagcgagatggtcaagccgatacgtctgaagatgaacgt
tatgtactcgccccatctttcaattggcaagcgacagaaagcacattagtgaacgtgaat
gtttactatcaaaatgatccatcagcaggtatctacacgactgtgcctgcgtctggctca
gtgattaaaaacccacttggctcgatgtcaccaagcacttatttgggggatgaggactgg
aacacttacgaacgcgaagttctgatgatgggttacaaagtccaacacgactttaacaac
aattggcaatttctacagaatgcccgctacatgaccgccgatgcctatcaggaaaacaca
tataacggtgcacttcaagcagataaccgtaccgttggtcgaaatgcctatttaaccgat
gaaaagtccaaatcctttgtgattgacaaccaactatctggctacgttaaaacaggaaat
tttgaacataacttattgttcgggcttgattatcagtatctagactcagatgtaaaatac
aaagacacgcttgggtattcgctaactcaggacatttttaatcctgaccacaacagcatt
gatcgtaatgcactgaatttccaatacaaacaaaacttagatatcaaaacgaagcagatt
ggcgtttatttccaagatcaagttcgttacgaccaacttgtaatgattgcaggtcttcgt
tgggataaatacgattcaaatacagacgccgttagcgattatctaggagcagtatccaac
agcaaggaagagttagacgataccaacgtatctttccgagtcggtggtttgtatgagcta
gactttggtctctcgccataccttacttactcggaaagttttgagccaattgcgggtgcc
gactcttctggtaaagcatttgagccatcaaccggtcatcaatgggagttaggctttaaa
tacgccccattatctggtgatatctcaggtaacttagcactcttccatattacgaagaaa
aacgcgatcttgaccgatccgaataatccttatgcaccgaactatcaagcgggcgaagtg
gtatcacaaggtattgaacttgaggcaaaatggcaagccacagcacaagctgatttcact
ctaggctatacatataccgatatggagattaccgaggacagttattacaaccaagaaggt
aaaacgccggtttgggtacctgagcaaacggcctctctatgggcaaattacttctttgaa
ggaaatctttcaggccttcgtaccagtgctggcgttcgctatatcggagaagcacaaatt
gatgcacagaatagtcaaaaagtaccggactacaccttgtttgatttggcagcaagttac
gatttctcaacggtatctgaatcaatgaaaggggctagcgtcacgctttctgcaagcaat
ctattcgataaagaatactattcttgttacgacaaaaataactgttggtttggcgctgag
cgctctatcgaagcgaagttagaatacaacttctaa
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