KEGG   Vibrio neocaledonicus: D3H41_10425
Entry
D3H41_10425       CDS       T06228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl03030  DNA replication
vnl03430  Mismatch repair
vnl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D3H41_10425
   03430 Mismatch repair
    D3H41_10425
   03440 Homologous recombination
    D3H41_10425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vnl03032]
    D3H41_10425
   03400 DNA repair and recombination proteins [BR:vnl03400]
    D3H41_10425
Enzymes [BR:vnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D3H41_10425
DNA replication proteins [BR:vnl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D3H41_10425
DNA repair and recombination proteins [BR:vnl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D3H41_10425
SSDB
Motif
Pfam: RNase_T RNase_H_2 CAF1
Other DBs
NCBI-ProteinID: QCO86471
LinkDB
Position
1:2074941..2075672
AA seq 243 aa
MRFSMIKKLFQKPTIQWPTKFEQKLEMAKDENLIAFYSNKPPAPETPLSEVEFVALDFET
TGLNPEKHDIITIGLVPFNLKRIFLRNSRHWKVRPQRALDEDSVIIHGITHSELIDAPDL
GDILSELLPCLSGKIIVVHYRRIEREFLDKALKSRLGEGIEFPVLDTLHLEETIQQKRSG
SLWERLKGKKPESVRLAQSRRRYGLPDYTPHHALTDAIATAELLQAQIAHHYSEEQPISE
FWL
NT seq 732 nt   +upstreamnt  +downstreamnt
gtgaggtttagcatgattaaaaagctctttcagaagccaaccattcagtggccaacgaag
tttgaacaaaagctggagatggcgaaagatgagaatttaattgcgttttatagcaacaag
ccgcctgctccagaaacaccgttatctgaggtagagttcgtggcgttagatttcgaaacg
acgggtttgaatcctgaaaaacatgacatcattactattggtttggtgccgtttaacctg
aagcgaattttcctacgtaactcgcgtcattggaaggtacgtccacagcgtgcactcgat
gaagattcagtcattatacacggtattactcacagcgaattgatcgatgcgcctgactta
ggcgatatcttaagcgagctgctaccatgcttaagcgggaaaatcattgttgttcattac
cgtcgtatcgagagagagtttctggataaagcgctcaaaagccgtttaggggaaggtatc
gagtttcctgttttagatacgctgcaccttgaagaaacgattcaacagaaacgttcaggc
tctctctgggagcgtttaaaagggaaaaaaccagaatcggttcggctagcgcaatctcga
cgccgttatgggctgccagactatacgcctcaccatgcattaaccgatgcaattgctacc
gcagagctactgcaagcgcaaatcgcccatcattacagtgaagagcaacccatcagtgag
ttctggctgtaa

DBGET integrated database retrieval system