Vibrio neocaledonicus: D3H41_11165
Help
Entry
D3H41_11165 CDS
T06228
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
D3H41_11165 (lapB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_16
TPR_12
TPR_8
TPR_20
TPR_1
ARM_TT21_5th
TPR_11
TPR_Slam
ANAPC3
ARM_TT21_N
TPR_15
ARM_TT21_C
TPR_CcmH_CycH
ARM_TT21
ARM_TT21_4th
TPR_9
Zn_ribbon_15
SPG48
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QCO86597
LinkDB
All DBs
Position
1:complement(2240053..2241228)
Genome browser
AA seq
391 aa
AA seq
DB search
MLELLFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYMTGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVS
GFLDRAEKIFEQLVEEPDYKEAALQQLVTIYQQTREWEKAIYYANQLAKLGNKRSRMRAN
IAHFWCEIAMLDQADGNTNKAIQHFKKALAEDPKCVRASIALGRIYLESEDYKHTIKYLT
GVLEQDKDFISDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVSAELMLAQLVAHHENV
GAAQELLTKQLLKNPTMKGFYRLIDYHIAEAEDGRAKDSLSTLQAMVGEQLKVKPHYRCR
KCGFSTHSLYWHCPSCKGWGTIKPIRGLDGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactactcttcttgttgttgcctatagctgctgcgtatggctggtatatgggg
catcgcagcgctcagcaagacaagcagaagcaatctcatcaaatctctcgtcagtatatg
acgggtcttaatctgctgctctctgaccaatcagataaggctgtcgatcactttattgaa
ttgctccaagttgataacgagaccatcgatactcaccttgcgttgggtaacctgttccgg
tctcgtggtgaagtcgaccgcgcaatcagaattcaccaaaatcttatttctcgttcaggc
ttaacactggaccaaaagaacctcgcccttcaacagttagcgaaagactacatggtctct
ggttttcttgatcgtgcagagaaaatctttgaacagttagtcgaagagccagattacaaa
gaggcggctcttcaacaattagtgaccatttatcagcaaacacgagaatgggaaaaggcg
atttattacgcgaaccaattggctaagttaggtaataaacgctcaaggatgcgtgcaaat
attgcccatttctggtgtgaaatagccatgctcgaccaagctgatgggaatactaataag
gcaatacagcattttaaaaaagcgttagcggaagacccgaagtgtgttcgagcaagtatt
gctttgggacgaatttacctagagtctgaagactataagcacaccatcaaatatctgacg
ggggtacttgagcaagataaagactttatcagtgatgtcttgccaactattgcagaatgc
tatcatcatctgggtcaggaagatgaacttgtcgagtttctgcgagcttgtattgataag
aaagcaggcgtatcagccgagttgatgttggctcaattagttgctcatcacgagaacgtt
ggggctgctcaagagttactgacgaaacaattgctgaaaaatccaaccatgaagggcttc
taccgtttaattgactaccacattgcagaagcagaagatggtcgagcgaaagacagccta
tcaacactacaagcgatggtgggtgaacaattaaaagtgaaaccgcattaccgatgccgg
aagtgtggattttctacccattccctttattggcattgtccgtcctgtaaaggatggggg
acgatcaagccaatccgcggattggatggtgaataa
DBGET
integrated database retrieval system
