Vibrio neocaledonicus: D3H41_11335
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Entry
D3H41_11335 CDS
T06228
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vnl03009
]
D3H41_11335 (rluC)
Enzymes [BR:
vnl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
D3H41_11335 (rluC)
Ribosome biogenesis [BR:
vnl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3H41_11335 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
PAD
Cupin_2
Orexin
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
QCO86630
LinkDB
All DBs
Position
1:complement(2275080..2276024)
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AA seq
314 aa
AA seq
DB search
MNEIRTKVQFVDIDEDMAGQRIDNFLRNQLKDIPKSMIYRIVRKGEVRVNKKRIKAEYKL
KAGDLVRIPPVTVEKKDDDVAPSTKLNKVAELENMIIFEDDHMLILNKPSGTAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVKKFYLAL
VMGQWKSSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKILEKFEQATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTGQVGLDRLFLHAANIKFQHPSNDEWMEINAPM
EPKLEKVLAGLRNA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaataagaacaaaagtccagttcgtcgatatcgacgaagatatggcgggtcag
cgcattgataactttttgcgcaaccaattaaaagacattcctaaaagcatgatttaccga
attgtgcgtaagggcgaagtgcgcgtaaataaaaagcgtataaaagcagagtacaagtta
aaagcaggcgatctcgttcgtattccaccggtgaccgtcgagaaaaaagatgacgatgtc
gcaccaagtacgaaacttaacaaagtcgctgagttggaaaatatgattatcttcgaagat
gatcatatgttgattctaaacaaaccatctggcaccgctgtgcatggtggcagtggttta
aagtttggtgcgattgaagcgcttagggctctgcgtcctcaagctcgctttcttgaactt
gtgcatcgtattgaccgtgatacttcagggattttgctggttgctaagaagcgttctgca
cttcgtcacttgcaagcccagtttcgtgaaaagacagtaaagaagttttacttagctctt
gtcatggggcaatggaaaagcagttgtaaggttgtgaacgcgccactgctcaaaaacgaa
gtgaacagtattgttcgtgttaaccctaatggtaagccgtcagaaacgcgttttaagatt
ttggaaaagttcgaacaagctacattgattcaggcgagtccgattactggtcgaactcac
caaatacgagttcatacgcaatacactggtcacccaatcgcttgggatgatcgctacggt
gatcgtcgctttgatgcttacacaggtcaagttggtttagatcgtttgttcctacacgcg
gcaaacatcaagttccagcacccatcaaatgatgagtggatggaaatcaacgcaccgatg
gaaccgaaactagaaaaagtgttggcgggtttaagaaacgcgtaa
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