Vibrio neocaledonicus: D3H41_11830
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Entry
D3H41_11830 CDS
T06228
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K03442
small conductance mechanosensitive channel
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_11830
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_11830
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Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
GNAT_acetyltran
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
QCO86716
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Position
1:complement(2383964..2385643)
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AA seq
559 aa
AA seq
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MTFHFPQKLRLTSWVTLFALAVIMFSPMAVHATATDDIQEPSAAEISIDNLNREIVDLSQ
SLSQASGDERDALQLQLFQKNEELRSQLASAIERETISRDKLILLVKKQEQYSEDATNYL
SEKIKKVVEDLNKAKDEEKLALVNDYRELQRYLDVSFDSSWQNLAWLKELGAQNERAEAE
LKDKIDKRMRLLSASIEYLSQQSEIIGSQLSSSPESEKASLQLSQLITKQRLNIATESLR
NLISIGDKVGLETSEYKRQIFEVTGNITHDLLNTKVVWSILSHWSNSALDWFAENAPQHI
FQLFVFALILLIARGLAKLTRKVVRKAVASKNLKLSHLMQDFFISMSGKFVWVIGIMVGL
SQLGLNLAPILTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDFVYAGGVDGKVS
HMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYADDLLKAESVLS
DIITSHPSVLRTPEPMIKVHTLNTSSVDFIVRPWVKTDDYWDVYWDVTKEVKLRFDREGI
SIPFPQQDVHLHMVEKQDA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcatttcccccagaaactgcgcctgacatcttgggtgacattattcgcactt
gccgtcattatgttctccccaatggctgttcatgcgactgctactgacgatatccaagag
ccttctgctgccgaaatctcgattgacaacttgaaccgagagattgtggatttatcccaa
agcctctcgcaagcgagtggcgacgagcgtgatgcccttcaactgcaactattccaaaag
aatgaagaattaagaagccagttagcgtcagcgattgaacgtgaaactatctctcgcgac
aagctgatcttgctagttaaaaaacaagaacaatactctgaggacgcgacgaactatcta
tcggaaaaaataaagaaagtcgtcgaggatttaaataaggctaaggatgaagagaagctt
gctcttgttaatgattatcgagagctacagcgttatcttgatgttagcttcgattcgagc
tggcaaaatctcgcttggttgaaggagctaggggcccaaaacgagcgcgcagaagcggaa
ctaaaagataaaattgataaacgtatgcgcttactgtctgcttcaattgagtacttgagt
cagcaaagtgagatcattggttcccaactttcgtctagcccagagtcggaaaaagcgtcg
ttgcaacttagtcagctcattactaaacaaaggctaaatattgcgacagaaagcttacgc
aacctgatttcaattggtgataaagtcggtttagaaacgtctgaatacaaacgccaaatt
tttgaagtgacgggtaatatcacccatgatttactaaataccaaagttgtgtggtcaata
ctgagtcactggtccaactcggcactggattggtttgccgagaatgcaccgcagcatatc
ttccagttgtttgtttttgcgctgattttattgatcgctcgcggactggctaagttaact
cgcaaagtcgtccgtaaagcagttgcatcgaaaaacttaaaactttcccacttgatgcag
gacttctttatctcgatgtccggcaaattcgtgtgggtgatcggtatcatggtgggctta
tctcagcttggtttgaacctagcgccaatcctaaccggttttggtattgctggtgtgatt
attggtttcgcgttgcaagacacgttatccaacttcgcggcgggtatgatgctgcttatt
tatcgcccatttgatgttggtgattttgtgtatgctggcggtgtggatggcaaggtaagc
catatgagtttggtgaacaccacaatccgtacgtttgataaccaaattattattgtgcct
aacagcaaaatctggggagatgttattaagaacgtcacgcatgaacgcattcgccgcgtg
gatatggtgtttggcattggctatgcggatgacctcttaaaagcggagtcagtattgtct
gatatcattacctctcacccttcggtacttcgcactccagagccaatgatcaaagttcat
acattaaatacgtcttctgtagattttattgtgcgtccttgggtaaaaacggatgattac
tgggatgtatactgggatgtgacaaaagaggtgaaactacgcttcgaccgagaaggtatt
tcgattcctttcccacaacaagatgtgcatttgcatatggtggagaagcaagacgcttaa
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