Vibrio neocaledonicus: D3H41_13270
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Entry
D3H41_13270 CDS
T06228
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_13270 (truB)
Enzymes [BR:
vnl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D3H41_13270 (truB)
Transfer RNA biogenesis [BR:
vnl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D3H41_13270 (truB)
Prokaryotic type
D3H41_13270 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QCO86986
LinkDB
All DBs
Position
1:complement(2675343..2676296)
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AA seq
317 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLDKLEACIDQFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYENMVTLEQLNELLEQAHREERAPRELLDPLL
LPMDTAVEDLPEVNLVPELADMVQHGQPVQVFGAPTEGSLRLTMGEERLFIGVGEMNEDG
KIAPKRLVVFRDDVASK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatactgttggacaaaccaaca
ggtatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgccgagaaagca
ggccacactggagccttggacccattagcgacaggcatgctgccaatttgcttgggtgaa
gcgacaaaattttctcagtttcttcttgattctgataaacgctaccgtgtgatcgcaaag
ctgggtgaacgtaccaatacgtctgactcggatggtgaagttgtagagacgcgtccagtc
gatgttacgttagacaagctagaagcgtgcatcgatcagttccgtggtgaatctgatcaa
gtgccttccatgttctctgcgttgaagtatcaaggtaaacccttgtatgaatacgctcgt
aaaggcatcgaagttccgcgtgaatctcgtaagatcacggtatatgagattgttcttcac
cgttttgaaggcgatgaagtagagatggaagtgcactgctctaaaggtacctatattcgt
actatcgttgatgatctgggcgaaatgttaggttgtggtgcgcacgtaactatgcttcgt
cgtactggtgttgctaaatacccttacgagaatatggtaacacttgagcaactaaatgag
ttgctagagcaagctcaccgcgaggaacgagcgcctcgagaactactggacccactgctt
ttgccaatggatacagcggtagaagacttaccagaagtcaacttggtgcctgaactggcg
gatatggtccaacatgggcagcccgttcaagtatttggtgctccgactgagggctcactt
cgccttactatgggtgaagaacgcttgtttattggcgttggcgaaatgaacgaagatggc
aaaatcgcccctaagcgattggtcgtgttccgagatgacgttgcatccaagtaa
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