Vibrio neocaledonicus: D3H41_13285
Help
Entry
D3H41_13285 CDS
T06228
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnl03021
]
D3H41_13285 (nusA)
03009 Ribosome biogenesis [BR:
vnl03009
]
D3H41_13285 (nusA)
Transcription machinery [BR:
vnl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D3H41_13285 (nusA)
Ribosome biogenesis [BR:
vnl03009
]
Prokaryotic type
rRNA transcription factors
D3H41_13285 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QCO86989
LinkDB
All DBs
Position
1:complement(2679540..2681027)
Genome browser
AA seq
495 aa
AA seq
DB search
MSKEILAVAEAVSNEKAVPRERIFEALEIALATSTKKKYEIEIDVRVAIDRKTGEFVTYR
RWLVVDDVENPTKEISLEAAQYEDDSIELGDYVEDEIESVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGDLITGVVKKVNRDTIVLDLGNNAEAVILRDDQLPRENFRPGDRVR
GLLYKVAPEARGFQLFITRSKPEMLAELFRVEVPEIAEDIIELKGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DAHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVADLQKKHAEESQASIENFM
KYLDIEEDFAQLLVEEGFSTLEEIAYVPVNELLEIDGLNEELIEELRGRAKDALTTIALA
QEESFEGLEPAEDLLALEGLEREMAFKLAAKGVATLEDLADQGIDDLEGIEGLTEERAGE
LIMAARNICWFGEEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattttagcggtagcagaagcggtatcgaacgaaaaagcggtacctcgt
gagcgtatctttgaggctcttgagattgctctagcaacttctacaaagaaaaaatacgaa
atcgaaatcgacgtacgtgttgccattgaccgtaaaaccggtgagtttgtaacttaccgc
cgttggttagttgttgatgacgttgagaaccctacaaaagagatctcactagaagcagcg
caatacgaagatgactcaatcgagcttggcgactacgtagaagacgaaatcgaatcagta
acgtttgaccgtattacgactcaaactgctaagcaagttatcgtacaaaaagttcgtgaa
gctgagcgcgcacaaatcgttgaacagttcatcgacaatgaaggtgatctaatcactggt
gtcgtgaaaaaagtaaaccgtgacacaatcgtgcttgatcttggtaataacgctgaagcg
gtaatcctgcgtgatgaccaacttcctcgtgaaaacttccgtccaggcgaccgcgtacgt
ggccttctttacaaagtcgcgcctgaagcacgtggtttccaattgttcatcactcgttct
aagccagaaatgttggcagaactgttccgtgttgaagtgcctgaaatcgcagaagatatt
atcgagctgaaaggcgcagcacgtgatcctggttctcgcgctaagatcgctgtcaaaaca
aatgacaaacgtatcgaccctgtaggtgcgtgtgttggtatgcgtggtgcacgtgtacaa
gctgtttctggcgaacttggtggggagcgtatcgatatcgttctttgggatgataaccca
gctcaattcgttatcaacgcaatggcgccagctgatgttgcttctatcatcgttgatgag
gatgcacactcaatggacatcgcagttgaagctgacaacctagcgcaagctattggtcgt
aacggtcaaaacgtgcgtctagcatctcaactaacaggttgggaactgaatgttatgaca
gttgctgatcttcagaagaaacacgctgaagaatcacaagcatctattgaaaacttcatg
aagtacctagatattgaagaagacttcgctcaacttcttgttgaagaaggtttctcaacg
ctagaagaaatcgcatacgtgccagttaacgagctactagaaatcgatggtttgaatgaa
gaactaatcgaagagcttcgtggacgtgcaaaagatgcactaacgacgatcgcactagca
caagaagagtcttttgaaggtctagaaccagctgaggacctacttgcacttgaaggtctt
gagcgtgagatggcatttaaattggcagcgaaaggtgtagcgacactggaagatcttgct
gaccaaggtattgacgatttagaaggtatcgaaggcctgaccgaagaacgtgcaggtgag
ctaattatggccgcacgtaacatctgttggttcggcgaagaagcataa
DBGET
integrated database retrieval system
