Vibrio neocaledonicus: D3H41_13330
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Entry
D3H41_13330 CDS
T06228
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vnl03009
]
D3H41_13330 (rlmE)
Enzymes [BR:
vnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
D3H41_13330 (rlmE)
Ribosome biogenesis [BR:
vnl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3H41_13330 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Methyltransf_23
Reovirus_L2_MT1
Methyltransf_25
ILEI
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QCO86995
LinkDB
All DBs
Position
1:complement(2686862..2687491)
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AA seq
209 aa
AA seq
DB search
MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA
APGGWSQYAAKIVGDSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLERIQPSMVDV
VMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKEVRD
MFKAVKIRKPDSSRARSREVFVVATGYKG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaaaacattcggctagttctggtcgttggttgaaagaacactttgatgat
aaatacgcgaatgaagcccgaaaaaaaggctaccgctcacgtgcttatttcaagatcgat
gagattcaaacgaaagataaattgttaaagcctggaatgacagtcgtcgacttgggggct
gcgccgggcggatggtctcaatatgctgctaagatagtaggggacagtggtcagatcatc
gcgtgtgacttgcttcctatggacccgattgctggcgttagctttttacaaggcgacttt
cgtgatgatgcagtattggaagctttgctagaaaggatccaaccttccatggtagacgta
gtaatgtctgatatggcgcctaacatcgcgggaaacaattctgttgatcaacctcgcgct
atgtatttagttgaattagctttagatatgtgtcgacaagttctagcgcctaatggtagc
tttgtcgtaaaggttttccaaggggaaggcttcgatcagtatgtgaaagaagtccgagac
atgtttaaagccgtaaaaattagaaaaccagactcatcgcgagctcgctctcgagaggtc
ttcgtcgtagccactggttacaaaggttaa
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