Vibrio neocaledonicus: D3H41_13920
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Entry
D3H41_13920 CDS
T06228
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnl03019
]
D3H41_13920
03009 Ribosome biogenesis [BR:
vnl03009
]
D3H41_13920
03036 Chromosome and associated proteins [BR:
vnl03036
]
D3H41_13920
Enzymes [BR:
vnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
D3H41_13920
Messenger RNA biogenesis [BR:
vnl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D3H41_13920
Ribosome biogenesis [BR:
vnl03009
]
Eukaryotic type
90S particles
RNase
D3H41_13920
Prokaryotic type
rRNA processing factors
D3H41_13920
Chromosome and associated proteins [BR:
vnl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
D3H41_13920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QCO87101
LinkDB
All DBs
Position
1:complement(2817920..2818597)
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AA seq
225 aa
AA seq
DB search
MNSPIDKLERKLGYQFQDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLEVVRGIVLSWYQSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaattgataaactagagagaaagctcggctaccagtttcaagatgccggg
cttatcaatttggcgctgacgcaccgcagcgccaacagtaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgatctgtaccatcgtttccca
aaagtgaacgaaggtgacatgagccgcatgcgtgctactttggttcgcggacatacattg
gcggaactgggtcgtgaattcgatctaggagattatttaaaattaggtccaggtgaattg
aagagtggcggttttcgccgagactctattttagccgatgcggttgaagccattattggc
gcaatttacctagacagtgatcttgaagttgtgcgaggcattgtactgagttggtatcag
tcacgccttgaagccatcaaaccaggcgtttcacagaaagatccgaaaactcgcctacaa
gagttcctacaaggcagaagaaaaccgctgcctgtctacacagtgactaatattaaaggt
gaagcgcacaaccaagagttcacggttgagtgcgaagtagcaggtgtggataagcctgta
atcggtaaaggcaccagccgccgcaaggcagaacaagcggctgctgaaacagcacttgag
caattaacaaatggctga
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