Vibrio neocaledonicus: D3H41_14075
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Entry
D3H41_14075 CDS
T06228
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnl02000
]
D3H41_14075
Transporters [BR:
vnl02000
]
Other transporters
Pores ion channels [TC:
1
]
D3H41_14075
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
ADAMTS_spacer1
Motif
Other DBs
NCBI-ProteinID:
QCO87129
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Position
1:complement(2844455..2846413)
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AA seq
652 aa
AA seq
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MSTLRLPVITATGILAFVSVPHVFANDAVSKMETVVVTASSYEQSQADAPASISVISREE
LDSRYYRDVTDALKSVPGVVVTGGGDTTDISIRGMGSKYTLILVDGKRQSTRETRPNSDG
PGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINVITRKDALEWTGNVQLGTVLQE
NSRSGGEQSANFFVNGPLAENLSLQVYGQYTTREEDDIEYGYEDKDMQSISSKLTYQINE
RHSVQLEGGTSAQSRRGNVGLSVPTTGCRGGCEDSLNEYRRNYVTVSHNGDWDSIGISDT
YLQREESENKSREMTITNTTFKSSLVTGIGNHTLTTGVDATHAELEDFTSNKASSKTETS
NTQWAVFIEDEWRIADPFSVTLGGRLDHDENYGAHFSPRVYGVWRVDPSWTVKGGVATGF
RSPQLREITPGWAQVSGGGNIYGNPDLDPETSLNKEISVLYQGDSGLDVSLTAFHNEFKD
KITRVVCPDTICTDGPNQWGADPTYRINVDEAVTQGIEATLASPLTETIYLSSSYTFTDS
EQKTGEYKGMPLQQLPKHLFNVDVTWQTTTDLESWAKVTYRGKEMDPVTGPSRNSIVEPA
YTFVDAGVTYQLTDNTRIKGAIYNLLDEEISYEEYGYIEDGRRYWLGLDVAF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcttagactgccagttattaccgcaactggtattttagccttcgtcagtgtc
cctcatgtttttgccaatgatgcagtttctaaaatggaaacagtggttgtaactgcatca
agctacgagcaatctcaagcggacgcgcctgcaagtattagtgtgatttcacgtgaggag
ttggactcccgttattaccgcgatgtgactgatgcactaaaaagtgtgccaggtgttgtc
gtgacaggtggtggtgatactaccgacattagtatccgtggtatgggttctaaatacact
ttgatactggtcgatggtaaacgtcaaagcacgcgtgaaactcgtccaaatagtgacggc
ccaggtatcgaacaaggttggttacctcctcttcaagcgattgagcgaatcgaagttatt
cgcggcccaatgtcgacgctttacggttctgatgcgattggtggtgtgattaacgtcatc
acacgaaaagatgcgttagagtggacgggtaatgttcaactgggcacggtactacaagag
aatagccgctcaggtggagagcagagcgcgaactttttcgttaatggtccgttggctgaa
aatttatctctccaagtatatggtcagtacacaaccagagaagaagatgacatcgaatac
ggttatgaagataaagatatgcagagtatctcttcaaaactgacttaccagattaatgag
cgccactcggtacaattagaaggtggcacgtcggcacaaagtcgtcgtggcaatgtgggc
ctttcagtgccgaccactgggtgtcgtggagggtgtgaagattcactgaatgaatatcgt
cgtaattacgtaacggtaagccacaacggtgattgggattcgattggcatttcagatact
tacttacagcgagaagagagcgagaacaaatctcgtgagatgacgatcaccaacaccacg
ttcaaatcgagcttggtgactggtatcggaaaccatacgttgacgacgggtgtggacgcc
actcatgcagagcttgaggatttcacctccaacaaagcgtcatcgaagactgaaacatcg
aatacgcagtgggctgttttcattgaagatgaatggagaatagctgatccgtttagcgtt
acgcttggtggtcgtctagatcatgacgaaaactatggcgcgcactttagtccacgtgtt
tacggtgtatggcgagttgatccgtcttggacggtgaaaggcggtgtggcaacaggtttc
cgttctccacaattacgtgaaattactcctggctgggcgcaagtcagtggtggcggtaat
atctacggtaacccagatcttgaccctgaaacgtcgctaaacaaagaaatcagcgtcttg
tatcaaggtgattctggcttagatgtctctttgacagcgttccataacgaattcaaagac
aagatcacacgtgttgtttgtccagacactatctgtactgatggtccaaaccaatgggga
gcagatccaacgtaccgtattaacgtggatgaagccgtcacacaaggtattgaagcgacc
ttagcatcgccgttaacggaaaccatttaccttagctcgagctacacatttaccgactca
gagcaaaaaacaggtgaatacaaaggcatgccgctgcagcagttaccaaagcatctgttt
aatgtggatgtgacttggcaaacgacaacggatctagagagctgggcgaaagtcacgtac
cgaggtaaagaaatggatccggttactggcccatcaagaaacagtatcgtagaaccagct
tatacctttgtggacgccggtgtgacataccagttaaccgacaatactcgtattaaaggc
gctatctataacttgctagacgaggaaatcagttacgaagaatacggatatattgaagat
ggtcgtcgctactggttaggtttagacgtcgcattttaa
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