Vibrio neocaledonicus: D3H41_15165
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Entry
D3H41_15165 CDS
T06228
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02020
Two-component system
vnl02024
Quorum sensing
vnl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3H41_15165
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_15165
05111 Biofilm formation - Vibrio cholerae
D3H41_15165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_15165
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
D3H41_15165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
HTH_24
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_36
HTH_11
Exonuc_VII_L
HTH_28
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QCO87307
LinkDB
All DBs
Position
1:3061112..3061744
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AA seq
210 aa
AA seq
DB search
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEDQERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQ
MARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEEQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggttctaggtaaacctcaaaccgacccaacattagagtggtttctttcacactgtcat
attcataagtacccttcaaagagcacgctaattcacgcgggcgaaaaggcagaaactttg
tactacatcgttaaaggttctgttgcggttcttatcaaagacgaagaaggtaaggagatg
atcctttcttacctaaaccaaggagactttattggtgaacttggtctattcgaggaagac
caagagcgcacagcttgggttcgtgctaaatctccttgtgaagttgctgaaatttctttc
aagaagttccgtcagcttatccaagtaaacccagacatcctaatgcgtctttctgcgcag
atggctcgtcgtcttcaagtaactagccaaaaagtgggtgacctggcgttcctagacgta
actggtcgtatcgctcagacgcttctgaaccttgcaaaacaaccagacgcaatgactcac
ccagacggcatgcaaatcaagatcactcgtcaagaaatcggtcaaattgttggctgttct
cgtgagacagtaggtcgtatcttgaagatgctagaagagcagaacctaatctctgctcac
ggtaaaaccatcgtggtttacggtactcgttaa
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