Vibrio neocaledonicus: D3H41_15285
Help
Entry
D3H41_15285 CDS
T06228
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
D3H41_15285
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnl01011
]
D3H41_15285
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vnl03036
]
D3H41_15285
Enzymes [BR:
vnl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
D3H41_15285
Peptidoglycan biosynthesis and degradation proteins [BR:
vnl01011
]
Peptidoglycan biosynthesis and degradation
Amidase
D3H41_15285
Chromosome and associated proteins [BR:
vnl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D3H41_15285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
LysM
AMIN
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
AMIN-like
HTH_35
Motif
Other DBs
NCBI-ProteinID:
QCO87330
LinkDB
All DBs
Position
1:complement(3088586..3090295)
Genome browser
AA seq
569 aa
AA seq
DB search
MLSFSNFRVVATFVATFLLLIPNLAFANVVKSFRVWPSPDETRVVIDLGSEADYSYFSLS
GPDRLVVDLKSTTMQAKLPVTVTDSPVLKLVRKSSPPEKGTYRLVFELKKSVQAELFKLS
PTPGGQYGHRLVIDLPHGKKASTSKPSKPAAASKDMSSVQRAQEVLIVIDPGHGGEDPGS
IGPSRRKYEKDAVLSISRKIAAQLDATPGIKTRMTRTGDYFVNLNRRVAIARENDAHLLI
SIHADAFTSPKPRGGSVFVLNTRRANTEIARWVENHEKQSELLGGSGNAFFTKTKDRNVN
QTLLDLQFSHSQKEGYKLATEILGEMGRVAHLHNTKPINTSLAVLRSPQIPSVLVETGFI
SNPTEERLLFQRAHQDKLAQAITKAVVKYLKDNPPEGTVFSPSAKPMVHIVKRGESLSVI
ANKYGLSSKALMSANNLKSTGLAIGQKLNIPSAGTIKVPSKPITVETETITHKVKSGEFL
GKIANHYKVKVSDIRRENNLKSDTLWVGQKLKITVAVKDKPIRKHKVSRGEFLGKIASKY
GVSVSSIRKANNLRSDQLAVGQVLIIPNK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtttttcaaattttagagtagtggcgacgtttgtcgccacttttctccttctc
atccccaatttagcatttgctaacgtcgttaagagttttcgagtttggccttcacctgat
gaaacgcgtgttgtcatcgatttaggctcggaagctgactattcctatttctctttatca
gggccggatcgccttgtcgtggatttaaaaagcacgacgatgcaggccaaactgcctgtt
actgttacggatagccctgttttaaaactggtacgaaaaagctcgcctccagagaagggc
acttatcgtttggtgtttgaactaaaaaagagcgttcaagcggaattatttaaattaagc
ccaacaccaggtgggcagtatggtcaccgcttggtgattgatttaccgcacggtaagaag
gcatcgacctctaaaccgagtaagccagcggcggccagcaaagacatgagttcagttcaa
cgagctcaagaagtgttaattgttatcgaccctggtcacggtggggaagaccctggctct
attggcccttcacgtcgtaagtacgagaaagatgcggtattgagtatctcaagaaaaatt
gctgctcagctcgatgcgactcctggtattaaaacgcgcatgactcgtacgggagattat
tttgtaaacttaaaccgtcgtgtcgcgattgctcgtgaaaatgatgcgcacttgctgatc
tccattcacgcagatgcgtttacttcaccgaagcctcgcggtggatcggtcttcgtacta
aatactcgtcgtgcaaataccgaaattgctcgttgggtcgagaaccatgagaaacagtct
gagttattgggcggctcgggtaatgcgttcttcacgaagacaaaagatcgtaacgtgaac
caaactttgttggacttgcagtttagtcattcacaaaaagaaggctataagctggcaaca
gaaatcctaggtgagatgggacgtgttgcgcacctacataacaccaaaccgatcaacacc
agccttgcggttttacgctctccacagattccgtctgtgctagtggaaacgggctttatt
tctaacccaacagaagagcgtttactgtttcaacgagcgcaccaagataagttagctcag
gctatcactaaggcggtcgtcaagtacttaaaagataacccaccagagggtacggtgttc
tcgccttcagcgaagccaatggtacatattgtaaagcgtggcgagtcattatcggtgatc
gcgaacaaatatgggcttagctctaaagcgctgatgtcggcaaacaacttgaagtcgaca
ggcttggcaattggtcagaagctcaacattccttctgctggtacgattaaagtgccaagt
aaaccgattactgttgagacagaaaccattacgcacaaggttaagtctggtgagttctta
ggtaagattgcgaatcactataaagtgaaggtttcagatatccgccgagagaataacttg
aagtcagataccttgtgggtagggcaaaagttgaagataacggtcgcggtaaaagataaa
ccgattcgtaagcacaaggtttctcggggtgagttccttggcaaaatagcgtccaaatac
ggcgttagcgtatcgagcattcgtaaagcgaataacttacgctctgatcagctagcggtt
gggcaagtcctgatcattccaaacaagtag
DBGET
integrated database retrieval system
