Vibrio neocaledonicus: D3H41_15440
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Entry
D3H41_15440 CDS
T06228
Symbol
frdA
Name
(GenBank) fumarate reductase (quinol) flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00020
Citrate cycle (TCA cycle)
vnl00190
Oxidative phosphorylation
vnl00620
Pyruvate metabolism
vnl00650
Butanoate metabolism
vnl00720
Other carbon fixation pathways
vnl01100
Metabolic pathways
vnl01110
Biosynthesis of secondary metabolites
vnl01120
Microbial metabolism in diverse environments
vnl01200
Carbon metabolism
vnl02020
Two-component system
Module
vnl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vnl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vnl_M00150
Fumarate reductase, prokaryotes
vnl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
D3H41_15440 (frdA)
00620 Pyruvate metabolism
D3H41_15440 (frdA)
00650 Butanoate metabolism
D3H41_15440 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
D3H41_15440 (frdA)
00720 Other carbon fixation pathways
D3H41_15440 (frdA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D3H41_15440 (frdA)
Enzymes [BR:
vnl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
D3H41_15440 (frdA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
DAO
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QCO87348
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All DBs
Position
1:3109744..3111543
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AA seq
599 aa
AA seq
DB search
MQIITTDIAVIGAGGAGLRTAIAAAEANPDLEVALISKVYPMRSHTVAAEGGSAAVIKDE
DSLDNHFNDTVGGGDWLCEQDVVEYFVENATREMIQMEQWGCPWSRKENGEVNVRRFGGM
KVERTWFAADKTGFHMLHTLFQTSMKYSNIKRFDEYFVVDLLVDEGEVQGLIAIHMSEGE
LVTIKAKSVVLATGGAGRVYHCNTNGGIVTGDGMAMAYRHGVPLRDMEFVQYHPTGLPGT
GILMTEGCRGEGGIIVNKNGYRYLQDYGMGPETPVGQPKNKYMELGPRDKVSQAFWHEQQ
KGNTIKHPLGDVVHLDLRHLGEEYLQERLPFICELAKAYVNVDPAKEPIPIRPTVHYTMG
GIETDGSCETRIKGLFAVGECASVGLHGANRLGSNSLAEFVVFGRVAGENAVKRAAEFKG
WNDAAIDAQVKAVEERIANLMNQEGDENWAEIRTEMGHTMEAGCGIYRQEDLMQATIDKI
TELKERYKRISIKDKGKVFNTDLLYAIEVGYGLEVAEAMVHSAILRKESRGAHQRLDDGC
TERDDVNFLKHSLAFYKPESAPSIDYSNVTITKSQPKARLYGEAAEKAAAEEKNAEEQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaattatcaccacagatatcgcagtcatcggcgcaggcggcgctggtcttcgtact
gctattgcagcggctgaagcaaacccagacttagaagtcgctctgatttctaaagtttat
ccaatgcgctcccacacggtcgctgcagagggtggctcagcagcagttatcaaggatgaa
gatagcttagacaaccacttcaacgacactgttggcggtggtgactggctatgtgaacag
gatgttgttgaatactttgtagagaacgcgactcgcgaaatgatccaaatggagcaatgg
ggttgcccatggagtcgtaaagagaacggtgaagtcaacgtacgccgctttggtggtatg
aaggttgaacgtacttggttcgctgcagacaaaactggcttccacatgcttcatacgcta
ttccagacatcaatgaagtacagcaacatcaaacgttttgatgagtactttgtggtggat
ctgcttgttgatgaaggcgaagttcaaggtctgattgctattcacatgtctgaaggcgag
cttgttactatcaaagcaaaatctgttgttctagcaacaggtggcgcgggccgtgtttac
cactgtaacaccaacggcggtatcgtaacgggcgatggtatggcaatggcttaccgtcac
ggcgttcctctacgtgatatggaattcgttcaataccacccaaccggtcttccaggcaca
ggtatcctgatgacggaaggttgtcgtggtgaaggcggtatcatcgttaacaagaatggc
taccgttacctacaagattacggcatgggccctgaaactccagttggccaaccgaagaac
aaatacatggaactgggtcctcgtgacaaagtttctcaagctttctggcacgaacaacag
aaaggcaacaccatcaaacacccactgggtgacgtggtgcacctagaccttcgccacctt
ggtgaagagtacctacaagaacgtctgccgttcatctgtgagctagcaaaagcttatgta
aacgtggaccctgcaaaagagccaattccaattcgtccaaccgttcactacaccatgggt
ggtattgaaacggacggcagttgtgaaactcgcattaaaggcctattcgcggtgggtgaa
tgtgcgtctgttggtcttcacggtgcaaaccgtctaggttctaactcactggctgagttc
gtggtatttggccgcgtagcaggtgaaaacgccgtgaaacgtgcggcagaattcaaaggc
tggaacgacgcggcaattgacgcgcaagtaaaagcggttgaagaacgcatcgctaaccta
atgaaccaagaaggcgacgaaaactgggcagaaatccgcacagaaatgggccacaccatg
gaagcgggttgtggtatctaccgccaagaagatttgatgcaagcgactatcgacaagatc
actgagttgaaagaacgctacaaacgcatcagcatcaaagacaaaggtaaagtgttcaac
actgaccttctgtacgccattgaagtaggctacggcctagaagtcgcagaagcgatggtt
cactctgcgattctacgtaaagaatctcgcggtgcgcaccaacgtctagacgacggttgt
acagaacgtgatgacgtgaacttcctaaaacactcacttgctttctacaagccagagtca
gcaccaagtatcgattacagcaatgtgaccatcactaagtcacaaccaaaagctcgtcta
tacggtgaagcagcagaaaaagccgcggctgaagagaagaacgcagaggagcaagcataa
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