Vibrio neocaledonicus: D3H41_15485
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Entry
D3H41_15485 CDS
T06228
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D3H41_15485 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnl03019
]
D3H41_15485 (groL)
03110 Chaperones and folding catalysts [BR:
vnl03110
]
D3H41_15485 (groL)
03029 Mitochondrial biogenesis [BR:
vnl03029
]
D3H41_15485 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vnl04147
]
D3H41_15485 (groL)
Enzymes [BR:
vnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D3H41_15485 (groL)
Messenger RNA biogenesis [BR:
vnl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D3H41_15485 (groL)
Chaperones and folding catalysts [BR:
vnl03110
]
Heat shock proteins
HSP60 / Chaperonin
D3H41_15485 (groL)
Mitochondrial biogenesis [BR:
vnl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D3H41_15485 (groL)
Exosome [BR:
vnl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D3H41_15485 (groL)
Exosomal proteins of other body fluids (saliva and urine)
D3H41_15485 (groL)
Exosomal proteins of breast cancer cells
D3H41_15485 (groL)
Exosomal proteins of colorectal cancer cells
D3H41_15485 (groL)
Exosomal proteins of bladder cancer cells
D3H41_15485 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCO87357
LinkDB
All DBs
Position
1:complement(3118043..3119689)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQESGSVDLENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVALEDLGQAKRVSITKENTTIIDGIGEEEMISGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALAATRAAVEEGVVAGGGVALI
RAASKIAHLTGDNEEQNVGIRVALRAMEAPIRQITKNAGEEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDAPAMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaaaatgctggaaggtgta
aacgttctggctgacgcagtaaaagtaacactgggtcctaaaggacgtaatgtcgttcta
gacaaatcttttggtgcaccgactatcactaaagatggtgtatcagtagcgcgtgaaatc
gagctggaagataaattccagaacatgggcgcacaaatggttaaagaagttgcgtctaaa
gcaaacgacgcagcgggtgacggtacaacaacagcaacggtactagcacaatctatcgtt
aacgaaggtctaaaagcagtcgcagcgggcatgaacccaatggatcttaagcgtggtatc
gacaaagctgttgccgcggcagttgagcaactaaaagagctttctgttgaatgtaacgac
acaaaagcgatcgcgcaggttggtactatctctgcaaactcagacgcaagcgtaggtaat
atcattgcagaagcaatggagcgtgtgggtcgtgatggcgttatcacggttgaagaaggt
caggcgctacaagacgagttagacgtagtagaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaccaagaatcaggcagtgttgatctagaaaacccattcatt
cttctagtagacaagaagatctcaaacattcgtgagcttcttccaacgctagaagctgtc
gcgaaagcatctcgtccactgcttatcattgcagaagatgtagaaggcgaagcgctagca
acattggttgtgaacaacatgcgtggcatcgtaaaagttgcagctgtgaaagcacctggc
ttcggtgaccgtcgtaaagcaatgctacaagacatcgctatcctaactggcggtactgtg
atttctgaagagatcggtctagagctagaaaaagttgcactagaagatctaggtcaagcg
aagcgtgtttctatcacgaaagaaaacacgactatcatcgatggtatcggtgaagaagag
atgatctctggccgtgttgctcagattcgtcaacaaatcgaagacgcaacttcagactac
gacaaagagaaactacaagagcgcgtagctaaactggctggcggtgttgcagtaatcaaa
gttggtgctgcgactgaagttgaaatgaaagagaagaaagaccgtgtagaagatgcgcta
gccgcaactcgcgcagcggttgaagaaggtgttgttgctggtggtggtgttgcacttatc
cgcgcggcatctaagattgctcacctaacgggtgacaacgaagaacaaaacgttggtatc
cgcgttgcactacgtgcaatggaagcgccaatccgtcaaatcacgaagaacgcaggtgag
gaagactcagttgttgcgaacaacgtgaaagcgggtgaaggtagctacggctacaacgcg
gcaacaggcgaatacggcgacatgctagaaatgggtatcctagatccaactaaagttact
cgttctgcactacaattcgcagcatcggttgcaggtctgatgatcactactgaagcgatg
gttactgacctaccgcaaaaagacgcgccagcgatgcctgacatgggcggcatgggtggc
atgggcggtatgggcggcatgatgtaa
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