Vibrio neocaledonicus: D3H41_16175
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Entry
D3H41_16175 CDS
T06228
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00300
Lysine biosynthesis
vnl00470
D-Amino acid metabolism
vnl01100
Metabolic pathways
vnl01110
Biosynthesis of secondary metabolites
vnl01120
Microbial metabolism in diverse environments
vnl01230
Biosynthesis of amino acids
Module
vnl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D3H41_16175
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D3H41_16175
Enzymes [BR:
vnl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
D3H41_16175
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QCO87456
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Position
1:complement(3264804..3265634)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILNIEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDNTLFCGAVSMGNPHVVTVVDDVDTAEVETLGPL
LESHERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGILQGLLDENV
KVSLPGGELRIAWQGPGKPLFMTGPTTHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggcaacgacttcatggtcgtcgactgt
attacccagaacgtgtttttctcgcaagacctgatccgccgcttggcggatcgtcatact
ggcgttggttttgaccaattgcttgtggtagaggccccttacgaccctgaaactgatttc
cattatcggatttttaatgccgatggtagtgaagttgaacagtgtggtaacggtgcacgc
tgttttgcccgctttgttcgcttgaaggggctgaccaataaatacagcatcagcgtgagc
accaagaaaggaaagatgattctcaacatcgaagatgatggggaagtgacggtcaacatg
ggcgtgccagagtttgaaccgaacaaaattcctttcaaagcgaagcaaaaagagaaaact
tacatcatgcgagcaggcgacaataccttgttttgtggtgctgtgagcatgggtaacccg
cacgtagtgaccgtggtcgacgatgtggatacggcagaagtggaaactctcggtccgctg
cttgagtcgcatgagcgtttcccagagcgcgtcaacgctggctttatgcaggtggtgagt
cgtgaccatattcgtcttcgagtttacgagcgaggcgcaggagaaacacaagcttgtggt
agtggtgcatgcgcggcagtcgcggttgggattctgcagggcttgttggatgaaaacgtt
aaggtttctctacctggtggtgaattgcgaattgcatggcaaggccctggcaagccgttg
tttatgaccggacctacaacgcatgtatttgatggtcaattgtcttgctag
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